Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03060 ATGAATCACCCTGGCCAGATTGGAAATGGTTACGCCCCTGTTCTTGACTGCCACACCTCCCACATTGCTGTCAAGTTTGCTGAGCTTGTTACCAAGATCGACAGGCGTTCTGGTAAGGAAATTGAGAAGGAACCCAAATTCTTGAAGAATGGTGATGCTGGTATCATTAAGATGGTTCCCACCAAGCCCATGGTTGCTGAGACTTTCTCTGAATATCCTCCACTCGGCCGTTTTGCTGTCAGAGACATGCGTCAAACTGTGGCTGTTGGAGTCATCAAGGCTGTGGAGAAGAAGGAACCCAGCGGAGGACCCAAGCCCAAGAAGAAGTGA 330 0.4939 MNHPGQIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKEIEKEPKFLKNGDAGIIKMVPTKPMVAETFSEYPPLGRFAVRDMRQTVAVGVIKAVEKKEPSGGPKPKKK 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03060 109 PANTHER BNAC08G43440D PROTEIN 1 103 - -
Tsu01g03060 109 CDD EF1_alpha_III 1 92 - -
Tsu01g03060 109 Pfam Elongation factor Tu C-terminal domain 4 95 IPR004160 -
Tsu01g03060 109 PANTHER TRANSLATION FACTOR 1 103 - -
Tsu01g03060 109 Gene3D Translation factors 1 96 - -
Tsu01g03060 109 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 1 95 IPR009001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03060 Tsu-Chr1 37559657 37560218 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03060 1 103 Eukaryotic Initiation Factors Gene Family AT1G07930 88.350 5.58e-65 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03060 K03231 - qsu:112038967 189.889