Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03057 ATGATGAGCAATGGAGATTCTGAATTATCAGCTTTTGAGTCtaaattttcatcttcttctgatGCTAAATTGTCATTTGCTTCAGTAAAAGATGCTTCAAGGAAAAGACCAATGGATCTTAGATTAATTCATGGATCTGCTTATGGTCACTCTTGGTTTGGTAAGTGGGGTTATAAGTTCTGTCGTGGAAGATTTGGTGTAACAAAACTAAACTACTATGAAGCAATGGAAACTCTTGGTTCATTCGTGCATGATGATATTGTAAGAGATTTGAGaataattgtaattcaaactcaaattggtAGGTTTcccaatgttgagtttgagtGA 330 0.2879 MMSNGDSELSAFESKFSSSSDAKLSFASVKDASRKRPMDLRLIHGSAYGHSWFGKWGYKFCRGRFGVTKLNYYEAMETLGSFVHDDIVRDLRIIVIQTQIGRFPNVEFE 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03057 109 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 27 91 - -
Tsu01g03057 109 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 27 91 - -
Tsu01g03057 109 MobiDBLite consensus disorder prediction 1 33 - -
Tsu01g03057 109 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03057 Tsu-Chr1 37552690 37553019 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03057 29 79 PHD Transcription Factor Family AT5G22260 50.980 2.16e-13 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03057 - - mtr:MTR_5g077750 103.219