Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03033 ATGCCTTTGAAAACTATCGTGAAAATATCTGCTGATGCCTATACTCCCCGTGGTGTCTCTGTTCCTGCACTTGACAAAGAAACACTTTGGGAATTTCAGCCTAAGAAAATTGGTTTCCTGAATCTTTCTCTGGATAATTTACCATTGCAAACTGTTTTCGAGAACAGTTTAATGGAACACCGTGTTGCACTTCCTCCTGATGCGACGGGAAAGGTTACCTATGTAGCACGGGCTGGCCAATATTCCTTGAAGGACACTGTATTGGAGCTTGAGTTTCAAGGTGTCAAAAATAAGTTCACCATGCTTCAGAGTTGGCCTTTACGTACACCAAGGCCTATTGCATCAAAACTTGCAGCTGATACTCCTCTTCTTACTGGTCAGCGTGTTCTTGATGCCCTTTTCCCCTCCGCTCTTTCTAAGTATTCAAATTCTCATGCCGTTATTTACATTGGCTGTGGAGAACATGGAAATGAAATGGTAGAGGTTCTGATGGACTTTCCACAACTCACAATGACATTACCTGATGGCCGTGAAGAATCTGTCATGAAGCGTACAACACTTGTGGCTAACACTTCAAACATGCCAGTGGATTTAAACACTTGTGAAGCTTCAATTTATACAGAGATATGGGTCACAATGTCAGTATGA 648 0.4228 MPLKTIVKISADAYTPRGVSVPALDKETLWEFQPKKIGFLNLSLDNLPLQTVFENSLMEHRVALPPDATGKVTYVARAGQYSLKDTVLELEFQGVKNKFTMLQSWPLRTPRPIASKLAADTPLLTGQRVLDALFPSALSKYSNSHAVIYIGCGEHGNEMVEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVDLNTCEASIYTEIWVTMSV 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03033 215 Pfam ATPsynthase alpha/beta subunit N-term extension 2 117 IPR031686 -
Tsu01g03033 215 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 2 138 IPR022878 GO:0046034|GO:0046961
Tsu01g03033 215 Gene3D - 47 98 - -
Tsu01g03033 215 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 137 211 - -
Tsu01g03033 215 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 199 IPR027417 -
Tsu01g03033 215 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 136 207 IPR000194 GO:0005524
Tsu01g03033 215 Gene3D - 136 211 IPR027417 -
Tsu01g03033 215 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 2 138 - -
Tsu01g03033 215 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 137 211 IPR022878 GO:0046034|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03033 Tsu-Chr1 37147047 37148729 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03033 2 211 Primary Pumps ATPases(2) AT1G78900 69.697 6.16e-106 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03033 K02145 - pvy:116116295 320.087