LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu01g03033	ATGCCTTTGAAAACTATCGTGAAAATATCTGCTGATGCCTATACTCCCCGTGGTGTCTCTGTTCCTGCACTTGACAAAGAAACACTTTGGGAATTTCAGCCTAAGAAAATTGGTTTCCTGAATCTTTCTCTGGATAATTTACCATTGCAAACTGTTTTCGAGAACAGTTTAATGGAACACCGTGTTGCACTTCCTCCTGATGCGACGGGAAAGGTTACCTATGTAGCACGGGCTGGCCAATATTCCTTGAAGGACACTGTATTGGAGCTTGAGTTTCAAGGTGTCAAAAATAAGTTCACCATGCTTCAGAGTTGGCCTTTACGTACACCAAGGCCTATTGCATCAAAACTTGCAGCTGATACTCCTCTTCTTACTGGTCAGCGTGTTCTTGATGCCCTTTTCCCCTCCGCTCTTTCTAAGTATTCAAATTCTCATGCCGTTATTTACATTGGCTGTGGAGAACATGGAAATGAAATGGTAGAGGTTCTGATGGACTTTCCACAACTCACAATGACATTACCTGATGGCCGTGAAGAATCTGTCATGAAGCGTACAACACTTGTGGCTAACACTTCAAACATGCCAGTGGATTTAAACACTTGTGAAGCTTCAATTTATACAGAGATATGGGTCACAATGTCAGTATGA	648	0.4228	MPLKTIVKISADAYTPRGVSVPALDKETLWEFQPKKIGFLNLSLDNLPLQTVFENSLMEHRVALPPDATGKVTYVARAGQYSLKDTVLELEFQGVKNKFTMLQSWPLRTPRPIASKLAADTPLLTGQRVLDALFPSALSKYSNSHAVIYIGCGEHGNEMVEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVDLNTCEASIYTEIWVTMSV	215

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu01g03033	215	Pfam	ATPsynthase alpha/beta subunit N-term extension	2	117	IPR031686	-
	Tsu01g03033	215	PANTHER	V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A	2	138	IPR022878	GO:0046034\|GO:0046961
	Tsu01g03033	215	Gene3D	-	47	98	-	-
	Tsu01g03033	215	PANTHER	V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A	137	211	-	-
	Tsu01g03033	215	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	96	199	IPR027417	-
	Tsu01g03033	215	Pfam	ATP synthase alpha/beta family, nucleotide-binding domain	136	207	IPR000194	GO:0005524
	Tsu01g03033	215	Gene3D	-	136	211	IPR027417	-
	Tsu01g03033	215	PANTHER	V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A	2	138	-	-
	Tsu01g03033	215	PANTHER	V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A	137	211	IPR022878	GO:0046034\|GO:0046961

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Tsu01g03033	Tsu-Chr1	37147047	37148729	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tsu01g03033	2	211	Primary Pumps ATPases(2)	AT1G78900	69.697	6.16e-106	316

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu01g03033	K02145		-	pvy:116116295	320.087

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