Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03019 ATGGCTAAGGAACAGTTGAAGGTGCTTAATGCACTTGATGTTGCCAAAACACAATGGTATCATTTTACTGCAATTGTGATTGCTGGAATGGGTTTTTTCACTGATTCCTATGATCTCTTCTGCATTTCCCTAGTCACAAAATTGCTCGGCCGTGTGTATTACTACGAAGGCGGTAACAATCCAGGTTCTCTGCCTCAAAATGTTTCTGCTGCAATCAATGGTGTTGCCTTCTGTGGAACACTAGCAGGACAACTTTTCTTTGGTTGGCTTGGTGATAAAATGGGAAGAAAACGTGTTTATGGAATGACCCTTATGCTTATGGTGTTTTGGCTTGGATTTGGAATTGGTGGTGATTACCCTCTTTCAGCTACAATTATGTCTGAGTATGCAAATAAAAAGACTCGCGGCGCTTTTATAGCAGCTGTTTTTGCTATGCAAGGTTTCGGAATTTTGGCTGGCGGCGCAGTAGCAATTATAGTTTCATCTATTTTTAAAGCTTTGTATCCTGCTCCGGCGTTTCAAGTTAATCCCGTTTTGTCCACGGTTTCGCAAGCTGATTATGTTTGGAGGATAATCTTAATGTTTGGTGCAATTCCAGCATTGCTTACATACTATTGGAGGATGAAAATGCCTGAAACTGCAAGATACACTGCCTTGGTTGCCAAGAATACTAAACAAGCTACTGCAGATATGTCGAAAATTTTGCAAGTTGAGATTGAAGCTGAACAGGAAAATGTTCAGCAATTGGATCAAACACAAGAAGGGACGAATGAGAatgattttggtttgtttaCAAAAAGGTTTCTTCGCCGTCACCGACTTCATTTGCTTGGAACTGCCATTACTTGGTTCTTGTTGGATATTGCTTATTATAGTCAGAATCTTTTTCAGAAAGATATTTTTAGTGCAATTGGATGGATACCAGAAGCTAAAACCATGAGTGCCATTGAAGAGGTTTATAAAATTGCTAGAGCACAAACTCTAATAGCACTTTGCAGCACTGTTCCTGGTTATTGGTTTACGGTGGCGTTGATCGATAGAATCGGAAGGTTTACAATTCAGTTGATGGGATTTTTCTTCATGACTGTGTTCATGTTTGCATTAGCTATTCCATATCACCATTGGACTATGAATGGAAACCAAATTGGATTTGTTGTCATGTATTCATTGACATTCTTCTTTGCGAATTTCGGTCCAAATGCAACGACGTTTGTGGTTCCAGCCGAGATTTTCCCGGCAAGGCTAAGGTCAACATGTCATGGAATATCAGCTGCTGCTGGAAAAGCTGGTGCAATGGTAGGTGCTTTTGGTTTCTTATATGCTCAAAATGCTATTGGAGTGAGAAATGTGCTTCTGCTTTTGGGTGTGGCCAACTTGTTGGGGATGATGTTTACATTCTTGGTGCCTGAAACTAAAGGAAAATCTTTGGAAGAGATTTCTGGTGAAGCTGATGAAAAAACAACTACTAATAGAGAATCTGCATTGGAGGCTGGTATTCGAGTTTAG 1506 0.3984 MAKEQLKVLNALDVAKTQWYHFTAIVIAGMGFFTDSYDLFCISLVTKLLGRVYYYEGGNNPGSLPQNVSAAINGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGAVAIIVSSIFKALYPAPAFQVNPVLSTVSQADYVWRIILMFGAIPALLTYYWRMKMPETARYTALVAKNTKQATADMSKILQVEIEAEQENVQQLDQTQEGTNENDFGLFTKRFLRRHRLHLLGTAITWFLLDIAYYSQNLFQKDIFSAIGWIPEAKTMSAIEEVYKIARAQTLIALCSTVPGYWFTVALIDRIGRFTIQLMGFFFMTVFMFALAIPYHHWTMNGNQIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAMVGAFGFLYAQNAIGVRNVLLLLGVANLLGMMFTFLVPETKGKSLEEISGEADEKTTTNRESALEAGIRV 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03019 501 Gene3D MFS general substrate transporter like domains 253 497 IPR036259 -
Tsu01g03019 501 Gene3D MFS general substrate transporter like domains 20 241 IPR036259 -
Tsu01g03019 501 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 473 IPR020846 GO:0022857
Tsu01g03019 501 CDD MFS_PhT 25 472 - -
Tsu01g03019 501 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 4 108 - -
Tsu01g03019 501 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 109 492 - -
Tsu01g03019 501 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE 4 108 - -
Tsu01g03019 501 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE 109 492 - -
Tsu01g03019 501 Pfam Sugar (and other) transporter 25 108 IPR005828 GO:0016021|GO:0022857|GO:0055085
Tsu01g03019 501 Pfam Sugar (and other) transporter 110 480 IPR005828 GO:0016021|GO:0022857|GO:0055085
Tsu01g03019 501 MobiDBLite consensus disorder prediction 478 501 - -
Tsu01g03019 501 Coils Coil 232 259 - -
Tsu01g03019 501 SUPERFAMILY MFS general substrate transporter 12 480 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03019 Tsu-Chr1 37012643 37014225 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03019 1 486 Inorganic Solute Cotransporters AT3G54700 72.952 0.0 772
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03019 K08176 - gmx:100802365 865.914