Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g03014 ATGCCGAGTCTACAAGGAATTAACATGGAAATGACATTGATTCATGATGCAAGAGAAGCTAAACATGAAAACATTCAAGAAGAGAACATTAATAGTCTTAACAAAATTGCTATCACCCAATGCATTGGTGAAACAGATGCCAATCTGAATGCACTAATTACTCGCTATGTGGAAACCATGACCAAGAACAACTTACGTAACTTAGGCTACCCCACTAATCAAGACTTCAATTATGACGCATTGGCACCATTGATTCATTTTCATTTGAACAATGCTGGAGATCCATTTTTTGGAAGTAGTTTCTCTCTAAATTCAATGACATTTGAAGTTAGTGTGCTTGATTGGTTTGCTAAATTATGGGAGATAAAGAAGAATGAGTATTGGGGATATGTCACATCTGGTGGAACTGAAGGCAATCTTCATGGAATTTTAGTAGGGAGAGAAAAATTTCCAGATGGAATTCTATATACATCGGAAGATTCACATTATTCAATACCCAAAATAGCAAGAATGTATCGAATGCAATGTGTCAAAGTTGGCTCTTTGATCTCCGGTGAAATTGATTGTGTTGAATTGGAGGCTTCTCTACGTGCCAACAAGGACAAACCAGCCATCATCAATTTAAACATAGGGACAACTTTGAAAGGAGCTATTGATGATGTTGATCTAGTAATCCAAACACTTTACAAATGTGGTTTTACTCGTGATCGATTCTATATTCATTGCGACGGTGCTCTATTTGGAATCATGTTGCCTTTTATCGAACAAGCTCCAAGGATTAGCTTCAAGAAACCTATCGACAGTGTAACTATTTCAGGTCATAAGTTTTTGGGATGTCCAACGCCTTGTGGAGTTTTGATAACTCGTTTGAAATACATCGATGCCCTCTCGAGAGAATGTGGCATCATTGCTTCAAGGGATGCTACAATCACAGGTAGCCGCAGCGGGCATGCTCCAATCGTATTGTGGTATGCTCTCAAAAAAAGTGGTTTAATTGGAATTGAGAATGAAGTGAATAATTGCATGATGAAATCACGTTACTTGTTAAATAAACTACGTGATGCTGGAATTGGTGCAATGTTAAATGAGTTTAGCAACATAGTTGTATTTGAGAGGCCCCAAGATGATCAATTTACCCGTAGGTGGAATTTGGCaagcaataaaaatatttcacatGTGGTAGTATTGCAACATGTCACTATTGAAATGCTTGACACATTTGTTCTTGAGTTTGTCCAAAATCGATTGATTTGGTCTAAATTTGGACAATTTCAGCCTCTATGCATTGCAAAGGAAGTTGGTTCAAGAAATTGTGCTTGTTCGGTACACAACTTATCCGGAAATTATCAGCTAAATTGTATGTGA 1365 0.3707 MPSLQGINMEMTLIHDAREAKHENIQEENINSLNKIAITQCIGETDANLNALITRYVETMTKNNLRNLGYPTNQDFNYDALAPLIHFHLNNAGDPFFGSSFSLNSMTFEVSVLDWFAKLWEIKKNEYWGYVTSGGTEGNLHGILVGREKFPDGILYTSEDSHYSIPKIARMYRMQCVKVGSLISGEIDCVELEASLRANKDKPAIINLNIGTTLKGAIDDVDLVIQTLYKCGFTRDRFYIHCDGALFGIMLPFIEQAPRISFKKPIDSVTISGHKFLGCPTPCGVLITRLKYIDALSRECGIIASRDATITGSRSGHAPIVLWYALKKSGLIGIENEVNNCMMKSRYLLNKLRDAGIGAMLNEFSNIVVFERPQDDQFTRRWNLASNKNISHVVVLQHVTIEMLDTFVLEFVQNRLIWSKFGQFQPLCIAKEVGSRNCACSVHNLSGNYQLNCM 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g03014 454 PANTHER SERINE DECARBOXYLASE 17 443 - -
Tsu01g03014 454 SUPERFAMILY PLP-dependent transferases 67 408 IPR015424 -
Tsu01g03014 454 Gene3D Aspartate Aminotransferase, domain 1 328 414 IPR015422 GO:0003824
Tsu01g03014 454 PANTHER - 17 443 - -
Tsu01g03014 454 Gene3D - 86 327 IPR015421 GO:0003824
Tsu01g03014 454 Pfam Pyridoxal-dependent decarboxylase conserved domain 97 357 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g03014 Tsu-Chr1 36935560 36937516 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g03014 210 351 Calmodulin-binding Proteins AT2G02000 29.221 1.39e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g03014 K25193 - gmx:100781665 647.506