Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu01g02998 | atgGATTCAAGTTCAACCTCAATTCCAAACTGTTCCACTTCAGATTTCTCCTCAGAATCCACTTCCTTCGAATTTGATTATCTTCCTTTCAACGAGAACGATCCCGAAGAGATGCTTCTCTATGGCATGATCAATGATGCAAACAATAacaccaccaacaacaacacaaGGGTTAAGGAAGAAGAAGTAAGTTCCGAAGAGAACGAACCGAGGAAGGAGAAGTCATACCGAGGTGTTAGGAGAAGACCATGGGGGAAATTTGCAGCAGAGATAAGGGATTCAACTAGAAATGGAATGAGGGTATGGTTAGGAACATTTGATAGTGCTGAAGAAGCTGCTTTAGCTTATGATCAAGCTGCTTTTTCTATGAGGGGTTCTGCTGCAATACTCAATTTTCCGGTTGAGATTGTGAGAGAATCGCTTAgtgaaatgaaaatgaattgtggTGATGGTTCTGAAGATGGGTGTTCACCTGTTGTTGCTTTAAAGAGGAAACATTCTTTGAGAAGGAAAATTGGTttcaagaagaacaaagaaaaagattACGGGAACAATAATAATAGTGTTGTGTTTGAAGATCTTGGTTCTGATTATTTGGAACAATTGTTGATGTCTTCTGATAAATTTCCTTGTACTCAGTGA | 642 | 0.3536 | MDSSSTSIPNCSTSDFSSESTSFEFDYLPFNENDPEEMLLYGMINDANNNTTNNNTRVKEEEVSSEENEPRKEKSYRGVRRRPWGKFAAEIRDSTRNGMRVWLGTFDSAEEAALAYDQAAFSMRGSAAILNFPVEIVRESLSEMKMNCGDGSEDGCSPVVALKRKHSLRRKIGFKKNKEKDYGNNNNSVVFEDLGSDYLEQLLMSSDKFPCTQ | 213 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu01g02998 | 213 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B | 25 | 205 | - | - | |
Tsu01g02998 | 213 | MobiDBLite | consensus disorder prediction | 46 | 77 | - | - | |
Tsu01g02998 | 213 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Tsu01g02998 | 213 | CDD | AP2 | 74 | 134 | IPR001471 | GO:0003700|GO:0006355 | |
Tsu01g02998 | 213 | Pfam | AP2 domain | 75 | 125 | IPR001471 | GO:0003700|GO:0006355 | |
Tsu01g02998 | 213 | ProSiteProfiles | AP2/ERF domain profile. | 75 | 133 | IPR001471 | GO:0003700|GO:0006355 | |
Tsu01g02998 | 213 | MobiDBLite | consensus disorder prediction | 59 | 76 | - | - | |
Tsu01g02998 | 213 | SUPERFAMILY | DNA-binding domain | 75 | 135 | IPR016177 | GO:0003677 | |
Tsu01g02998 | 213 | PANTHER | DNA-BINDING DOMAIN | 25 | 205 | IPR044808 | GO:0003700|GO:0009873 | |
Tsu01g02998 | 213 | Gene3D | AP2/ERF domain | 74 | 135 | IPR036955 | GO:0003700|GO:0006355 | |
Tsu01g02998 | 213 | PRINTS | Ethylene responsive element binding protein signature | 99 | 115 | IPR001471 | GO:0003700|GO:0006355 | |
Tsu01g02998 | 213 | PRINTS | Ethylene responsive element binding protein signature | 76 | 87 | IPR001471 | GO:0003700|GO:0006355 | |
Tsu01g02998 | 213 | SMART | rav1_2 | 75 | 139 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu01g02998 | Tsu-Chr1 | 36744956 | 36745863 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu01g02998 | 28 | 207 | AP2-EREBP Transcription Factor Family | AT3G23240 | 63.978 | 1.12e-75 | 225 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Tsu01g02998 | AP2 | 1.2e-15 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu01g02998 | K14516 | - | gmx:100790598 | 246.899 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tsu01g02998 | 01 | 36744956 | 36745863 | Tsu01g02998 | 01 | 36744956 | 36745863 | ECH |