Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02984 ATGTTTCCTACAATTTCATTTTGGTTATATTTTCTCTTTACTTTCAACTTCAATCAAAAAACAAGTGGTTCTTCCACATTAGGAAACCATACCGACAATTTCACATTGATCAAACTTAAGGAATCAATATCTATTGACCCAAATGGATTCCTCAATTCTTGGAATAAATCTACACACTTCTGTAACTGGCAAGGCATAACATGTGATGACAAGCATCAAAGAGTTACAATATTGGACCTACATGGACATCAGTTGCATGGAACTTTGTCTCCCCATGTTGGAAATCTCTCTTTTTTGAGAAAACTCACCCTTGTAAACAATAACTTCTTTGGAAAAATTCCACAGGAACTAGGTCGGTTGTTACAATTACAATATCTCAGTTTAAGTAATAACTCGTTTGCAGGAGAAATTCCTACAAACTTGACAAATTGCGCAAATCTTGAAGGCTTATACTTGATAAATAACAACCTAATTGGGaaaataccaattgaaattggCTCCCTTGAAAAACTTCAAATATTGAGTATAGCGGGCAATTATTTGATCAGAGGAGTTCCACCAGCCATAGGCAATCTTTCTTCCTTAACAGTATTTGCAGTTAGTTTTAACAACTTAGAAGGAGATATTCCACAAGAAATATGTCTTCTAAAAAACTTGACGACAATAATAGTTGGTGATAACAACCTTTCTGGTACATTTCCCTCTTGTCTTTACAATATGTCACTTCTTACTGCGATATCGGCTGCAGCGAATCATTTTCATGGCTCTCTTCCACCCAACATGTTTCATACCATCCCTACTCTCCTACAATTTTTCATTGGTGGGAATCAATTCTCAGGTCCAATCCCTACTTCCATTGAAAATGCTTCAATGTTGGTATATTTCGACATCAGTCAAAACCATTTTGTCGGACAAGTTCCAAGTTTTGGGAAGCTCAAAGATTTCCGGAGGCTAAATTTGGAAGGCAATAATTTAGGGTACAACTCAACTAAGGATTTAGAGTTTTTAAAATCATTGACAAACTGTAGTAAGTTGGAAGGGGTTTCTATAGCCTCTAACAATTTTGGAGGTAGTTTGCCAAATTCCTTAGGCAATTTATCCACCCAAATTAGTAGACTATATCTTGGGGATAACCAAATATCTGGAAAAATTCCTTCGGAATTAGGAAATCTAAATGGCTTAATTATCTTGACCATGGATAAAAATCACTTTGAAGGAGTTATTCCAGCTACTTTTGGAAAGTTtaaaaatatgcaaaatttGGATTTGGGTCAGAACAAACTGTCAGGAGATATACCAACTTTCATAGGTAACCTCAGTCAATTGTTTTACTTGGATCTAAGAGGAAATAAGTTAGAAGGAAATATTCCTCCAAGTATAGGCAACTGCCAAAAGTTACAATATCTAGTCATTTCACAAAACAATTTTAGAGGAATCATACCTTTAGTTATTTTTAGTCTTTCCTCTTTAACAAACTTACTAGACTTGTCACAAAACTCATTCAGTGGTAACCTACCTATAGAAGTTGGTATGCTAAAAAATATTGTTCAGATGAATTTCTCTGAGAATCTTTTGTCAGATGATATTCCAGATACCATAGGAGAGTGCATAAGCTTGGAGTACCTTTCTTTGCAAGGAAATTCCTTCCATGGAACCATTCCATCCTCTTTGGCTTCTCTCAAAAGTCTTCAATATGTAGATCTTTCAAGAAATCAGTTGTCTGGACCAATTCCTAATGCTTTGAAGAATATTTCTTCTTTAGAACACTTGAATATTTCTTTTAACATGTTGGAAGGTGAGGTACCAACAGAAGGTGTCTTTGGAAATGCAAGCCGAGTAGTGTTGATTGGAAACAATAAGCTATGTGGAGGTATTTCAGAGTTGAATCTAACGCTATGCCCTGTCAAAGGTATGAAATCTTCAAAGCATCATAAGTCCATGTTGATAGCAGTGATAGTTTGTTCggtttcttttcttctcatatttttagttattttaactATATGTTGGATGAGGAAAATAAACAAGAAACCGTCCTCCGATTCACCGACAATTGACCAGTTACCTAAGATTTCCTACCAAGAACTACATCAAGCAACTGATGGGTTTTTGATTAGTAATTTGATTGGGTCAGGAAGCTTTGGTTCTGTCTATAAAGGATATCTTGTGTCAGAAGATAAAGTTGTTGCCATAAAGGTTCTGAACCTTCAAAAGAAAGGGGCTGGTAGGagtttcattgctgaatgtaaTGCTCTAAAAAATATTCGACATCGAAATCTAGTTAAGATTTTAACATGTTGTTCTAGTATTGATAACAAAGGTCAAGAATTTAAAGCTCTAATTTACGAGTACATGAAAAATGGAAGCTTAGAACAATGGTTGCATCCAAATGAAGGTAGTGTCGAAATTCCTATATTATTGGACTTTGATCAAAgattgaatatatttattgatgTTGCTTCTTCAATACATTATCTACATCATGAATGTGGGCAATTGATCCTTCATTGTGATATAAAGCCCAGCAATATCCTTATTGACAATGACATGGTTGCTCATGTGAGTGATTTTGGCATAGCAAAATTAGTCTCAACCATTGACAATACCTCTCAGAAGGAAACTAGTTCAATTGGAATAAAAGGAACCGTTGGCTATGCTCCTCCAGagTATGGGATGGGTTCCGAAGTGTCTACATATGGTGACATGTATAGTTTCGGGATGCTTATGTTGGAAACTCTTACCGGAAGAAGACCCacaaatgaaatgtttgaagaTGGTTTAAATTTGCATAGAGAATTGCTTGGTTTCTCTTTTTATGATTGGACTTGCTTGTTCAGTGGAATCACCgaaagaaagaatgaatatAGTGGATGTCGCAAGAGAGCTAGATATGATAAAAAAGATCTTTATCACCGGTATCCACACTCGTGA 2931 0.3425 MFPTISFWLYFLFTFNFNQKTSGSSTLGNHTDNFTLIKLKESISIDPNGFLNSWNKSTHFCNWQGITCDDKHQRVTILDLHGHQLHGTLSPHVGNLSFLRKLTLVNNNFFGKIPQELGRLLQLQYLSLSNNSFAGEIPTNLTNCANLEGLYLINNNLIGKIPIEIGSLEKLQILSIAGNYLIRGVPPAIGNLSSLTVFAVSFNNLEGDIPQEICLLKNLTTIIVGDNNLSGTFPSCLYNMSLLTAISAAANHFHGSLPPNMFHTIPTLLQFFIGGNQFSGPIPTSIENASMLVYFDISQNHFVGQVPSFGKLKDFRRLNLEGNNLGYNSTKDLEFLKSLTNCSKLEGVSIASNNFGGSLPNSLGNLSTQISRLYLGDNQISGKIPSELGNLNGLIILTMDKNHFEGVIPATFGKFKNMQNLDLGQNKLSGDIPTFIGNLSQLFYLDLRGNKLEGNIPPSIGNCQKLQYLVISQNNFRGIIPLVIFSLSSLTNLLDLSQNSFSGNLPIEVGMLKNIVQMNFSENLLSDDIPDTIGECISLEYLSLQGNSFHGTIPSSLASLKSLQYVDLSRNQLSGPIPNALKNISSLEHLNISFNMLEGEVPTEGVFGNASRVVLIGNNKLCGGISELNLTLCPVKGMKSSKHHKSMLIAVIVCSVSFLLIFLVILTICWMRKINKKPSSDSPTIDQLPKISYQELHQATDGFLISNLIGSGSFGSVYKGYLVSEDKVVAIKVLNLQKKGAGRSFIAECNALKNIRHRNLVKILTCCSSIDNKGQEFKALIYEYMKNGSLEQWLHPNEGSVEIPILLDFDQRLNIFIDVASSIHYLHHECGQLILHCDIKPSNILIDNDMVAHVSDFGIAKLVSTIDNTSQKETSSIGIKGTVGYAPPEYGMGSEVSTYGDMYSFGMLMLETLTGRRPTNEMFEDGLNLHRELLGFSFYDWTCLFSGITERKNEYSGCRKRARYDKKDLYHRYPHS 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02984 976 Gene3D Ribonuclease Inhibitor 332 631 IPR032675 -
Tsu01g02984 976 Gene3D Phosphorylase Kinase; domain 1 684 784 - -
Tsu01g02984 976 SUPERFAMILY L domain-like 339 623 - -
Tsu01g02984 976 SMART LRR_sd22_2 367 393 - -
Tsu01g02984 976 SMART LRR_sd22_2 120 149 - -
Tsu01g02984 976 SMART LRR_sd22_2 168 194 - -
Tsu01g02984 976 SMART LRR_sd22_2 560 589 - -
Tsu01g02984 976 SMART LRR_sd22_2 415 441 - -
Tsu01g02984 976 SMART LRR_typ_2 168 192 IPR003591 -
Tsu01g02984 976 SMART LRR_typ_2 391 414 IPR003591 -
Tsu01g02984 976 SMART LRR_typ_2 120 144 IPR003591 -
Tsu01g02984 976 SMART LRR_typ_2 584 609 IPR003591 -
Tsu01g02984 976 SMART LRR_typ_2 439 463 IPR003591 -
Tsu01g02984 976 SMART LRR_typ_2 560 583 IPR003591 -
Tsu01g02984 976 SUPERFAMILY Protein kinase-like (PK-like) 679 931 IPR011009 -
Tsu01g02984 976 Pfam Leucine rich repeat N-terminal domain 32 69 IPR013210 -
Tsu01g02984 976 ProSiteProfiles Protein kinase domain profile. 703 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g02984 976 ProSitePatterns Serine/Threonine protein kinases active-site signature. 834 846 IPR008271 GO:0004672|GO:0006468
Tsu01g02984 976 SMART serkin_6 703 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g02984 976 Pfam Leucine rich repeat 396 452 IPR001611 GO:0005515
Tsu01g02984 976 Pfam Leucine rich repeat 538 597 IPR001611 GO:0005515
Tsu01g02984 976 ProSitePatterns Protein kinases ATP-binding region signature. 709 732 IPR017441 GO:0005524
Tsu01g02984 976 Gene3D Transferase(Phosphotransferase) domain 1 785 943 - -
Tsu01g02984 976 PANTHER OS04G0122200 PROTEIN 19 936 - -
Tsu01g02984 976 Gene3D Ribonuclease Inhibitor 154 266 IPR032675 -
Tsu01g02984 976 Gene3D Ribonuclease Inhibitor 267 331 IPR032675 -
Tsu01g02984 976 Gene3D Ribonuclease Inhibitor 32 147 IPR032675 -
Tsu01g02984 976 Pfam Protein kinase domain 706 920 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g02984 976 SUPERFAMILY L domain-like 31 325 - -
Tsu01g02984 976 PANTHER LRR RECEPTOR-LIKE KINASE 19 936 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02984 Tsu-Chr1 36610422 36613707 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02984 29 923 Receptor kinase-like Gene Family AT3G47570 47.461 0.0 802
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tsu01g02984 Pkinase 8.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02984 - - gmx:100785561 1186.4