Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02982 ATGGagcaaaaaatattttcttttctgcTTGCATACAGAGAGTTCAAGCCACACCTGCTTATGATCTTAGCCCAAGTGGGCTATACCTTTGTATATTTCATCACTGAAGCTTCCTTCAACCATGGAATGAGTCCTTATGTTTATGTTACATATCGCCATGTCGTGGCCGGGGTTGTGATGTTACCTTTTGCATATTTTCTAGAGAGAAAAGTAAGGCCAAAGCTGACATTTGCTCTTTTTATGGAAATTTTTGTGCTTTCAGTGTTGGGGATAACTTTGTCTCTAAATTTGTACTTTGCAAGCTTAAAGTATACTTCTCCAACCTTTCTTGCTTCCATGTACAACACTGTATCTTCCCTTACCTTCATTATTGCATTGGTACTCAGGTTTGAGGTTGTTGATATTCGAAATCCACGTGGCATAGCAAAAGTACTTGGAACAATCATCTCCTTAGCTGGTGTTATGACCATGACACTATACAAGGGACCTATAATGAAAAATTTGTGGCATCCTCTaatccatattcaaccaaaaagTGCTTCTATTAGTGAGGGCGGATTAAGGGGTTCACTTCTTACAGTTTCATGCTGTGTTACATTGTCTATGTGGTACATTATGCAGGCATCCACTTTGAAAAGATACCCAGCTCAATTATCACTCACTACATGGATGTGCTTTATTGGAGCAGCACAATCAGCTGTTTTCACAGTGATAGTAGAACACAATAACCCTTCAGCATGGATTATAGGGATCAACATTGACTTGTGGTCTACGATATATGGGGGAATTGTTGTTGGTGGATTGTTGATGTATATTCAACTATGGTGCACTGAGAAAAAAGGGCCAGTGTTTGTCACAGTCTTTAACCCTCTTTGTACAATATTTGTGGCAATTCTAGCATACTTCGTCCTTGGTGAAAAACTTTATTTGGGCAGcATCATAGGTGCATTTATTGTCATCATGGGTTTGTATTTGTTGCTGTGGGGTAAAGAAGGTGACAAAGAGGCTGATTTCAAGACCAAGCAGTGCACTAGTGAAGACCCAGAATGTAGAGTGTAG 1059 0.3824 MEQKIFSFLLAYREFKPHLLMILAQVGYTFVYFITEASFNHGMSPYVYVTYRHVVAGVVMLPFAYFLERKVRPKLTFALFMEIFVLSVLGITLSLNLYFASLKYTSPTFLASMYNTVSSLTFIIALVLRFEVVDIRNPRGIAKVLGTIISLAGVMTMTLYKGPIMKNLWHPLIHIQPKSASISEGGLRGSLLTVSCCVTLSMWYIMQASTLKRYPAQLSLTTWMCFIGAAQSAVFTVIVEHNNPSAWIIGINIDLWSTIYGGIVVGGLLMYIQLWCTEKKGPVFVTVFNPLCTIFVAILAYFVLGEKLYLGSIIGAFIVIMGLYLLLWGKEGDKEADFKTKQCTSEDPECRV 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02982 352 PANTHER WAT1-RELATED PROTEIN 15 346 IPR030184 GO:0016021|GO:0022857
Tsu01g02982 352 SUPERFAMILY Multidrug resistance efflux transporter EmrE 223 330 - -
Tsu01g02982 352 Pfam EamA-like transporter family 188 327 IPR000620 GO:0016020|GO:0016021
Tsu01g02982 352 Pfam EamA-like transporter family 17 157 IPR000620 GO:0016020|GO:0016021
Tsu01g02982 352 PANTHER WAT1-RELATED PROTEIN 15 346 - -
Tsu01g02982 352 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02982 Tsu-Chr1 36580721 36583481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02982 16 351 Nodulin-like Gene Family AT5G07050 41.477 6.40e-95 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02982 - - gmx:100527877 572.007