Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02979 ATGATCCCTATAGGGCGCGGACAGCGAGAATTGATTATTGGGGACAGACAAATAGGAGCAGCTCTGGCTGAATATTTTATGTACCATGAACGTCACACTTTAATCATTTATGATGATCTCTCCAAACAAGCACATGCTTATCGCCAAATGTCTCTTCTATTACGAAGACCGCCAGGTCGCGAAGCTTATCCCGCAgatgttttttatttacattctCGTCTTTTGGAAAGAGCCGCTAAATTAAGTTCTCAGTTGGGTGAAGGAAAACTTCGTCTCGACTCAAATCCTACGAAGCTGAGAGGTCCGCAGAAATTCTTGAAGTAG 324 0.4167 MIPIGRGQRELIIGDRQIGAALAEYFMYHERHTLIIYDDLSKQAHAYRQMSLLLRRPPGREAYPADVFYLHSRLLERAAKLSSQLGEGKLRLDSNPTKLRGPQKFLK 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02979 107 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 18 83 IPR000194 GO:0005524
Tsu01g02979 107 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 88 IPR027417 -
Tsu01g02979 107 Gene3D - 17 90 - -
Tsu01g02979 107 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 1 19 - -
Tsu01g02979 107 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 18 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02979 Tsu-Chr1 36467878 36470209 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02979 10 86 Primary Pumps ATPases(2) AT4G38510 34.615 4.07e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02979 K02111 - gmx:3989298 136.732