Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02965 ATGGAGGAACACCATATTAGAATTGAGAATGCTCGGCTGAAGGAGGAATTGGCCCGAGTGAATACCTTGTCCAGCAAATTCCTCGGCCGGCCAATATCGGCATTGAGTGCAATGTCTATGAAGAATCCGAATTTAGGTCTTGAATTTAATATGAGAAGGAACAAAGTTGCTGGTCCAAGCAATTCCAACATGTCACTGCCAATGGGATTTGATATGCGAAATGGAGTTATGGGAGCTCCACCTCCAAATTTTGCAATGCAAACACCGATGGGAATGATCGAAAATGATGCCCAACAGGAGAGATTTATGCTTATCGATCTCGCTTTAGCTGCTATGAATGAACTTATCAAAATGTATGAACCTGACTCCCAACTTTGGACTAAGAGTCCAGACAGTGGGAAATACATGCTTAACCATGACAAGTACGCAAGGATCGGTTCTTCTTTTAACAGTCTGAAACCAAATGGTTTTGTAACTGAAACTACAAGAGAAACTGGGCTGTTATACACCAACAGTGCGACTCTCGTGGAAATATTCCTCAATGCGCATGCCGAAGGTGTGTGGATCGTGGCTGATGTTTCAATTGACTTTGGTCGTAACAGTCCCAACGGAAATCCGTACAAGAGTAGTAAGAAGCTTCCATCTGGCTGTATTTCGCAGGACATGCCCAATGGTTTGTGCAAGCTCAATCGCAGTTTCAACAATGCGTCAGTTCGAAGTTCAATCACAATTTCGACAGGTAATGTTCAATGTCCTCCTTTTCCACTTGGTTGTTTCCTCAATAGGCTCACTATTAGGACTGAGGTTTACCATCTTTTGATTTGTCAAATTAACGATAATCTCATACTATATAAACTTGAGAGCTCTTCCAAAACTGAGTTATCTACTCCAGGTCTTCACAGTTTAGATTTTATCGGCACTAATGAAACTATTTGCGAGCCATCTTAG 948 0.4188 MEEHHIRIENARLKEELARVNTLSSKFLGRPISALSAMSMKNPNLGLEFNMRRNKVAGPSNSNMSLPMGFDMRNGVMGAPPPNFAMQTPMGMIENDAQQERFMLIDLALAAMNELIKMYEPDSQLWTKSPDSGKYMLNHDKYARIGSSFNSLKPNGFVTETTRETGLLYTNSATLVEIFLNAHAEGVWIVADVSIDFGRNSPNGNPYKSSKKLPSGCISQDMPNGLCKLNRSFNNASVRSSITISTGNVQCPPFPLGCFLNRLTIRTEVYHLLICQINDNLILYKLESSSKTELSTPGLHSLDFIGTNETICEPS 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02965 315 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 180 229 - -
Tsu01g02965 315 ProSiteProfiles START domain profile. 97 188 IPR002913 GO:0008289
Tsu01g02965 315 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 182 IPR042160 -
Tsu01g02965 315 Pfam START domain 183 229 IPR002913 GO:0008289
Tsu01g02965 315 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 180 229 IPR042160 -
Tsu01g02965 315 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 1 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02965 Tsu-Chr1 36231289 36234536 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02965 1 229 Homeobox Transcription Factor Family AT3G61150 31.525 1.87e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02965 K09338 - gmx:100820113 186.037