Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02939 ATGAACAACGGAATAAGTAGTTATGTCTTGGTGGCTTATAGGAACATCACTGCATGTCTCTTCTTCTCACATTTGCAGCATATCATGAAAGGTGTCATAGTGGTGACATTTGTTAAAGGTCTCGTCCTATTTGGAACTGTTGGAGCCAATATTCGAAGTAATCATCATGATGGCTTCCATGCAATTCTTGGATCAGTGTTTATTTTACTATCAACCTTAAGCTCTGCAGTTTCTAATATCCTCCGGaaTATCACCCTAAGCCAGCTCAACCTACCACTCACAGTTACATCACTCATATGTTTATTTGTCTCAATTGAAGCAGTAGTGGTGGCTGTGGTTATGAATAAAAAGATTTCTTATTCAGTTTGGTCGATTTTTGACTGGGATGTCAAACTGTTGTCAGCTCTTTACGCGggtataTTTTGCTCAGGGATAGGCTTCTACTTGCGAGGACAAGTAATGCAAGCTAGAGGTCCGGTTTTCGCAACAATGTTTAACCCTGTGTGTATGATATTGGTTGCTATGTCGGGATACTTCTTTCTTGACGAGCAACAATTACTAGGAAGGGTGATAGGTTCACTAATCATCTGTTGGGGCCTCTATTGTGTTGTATGGGGGAAAAATAAAGATAACAACCTTAGGCGTCAGGAAAATGCAAATGCGGTAGCAAATTCAATTACGGTGGAAAATCCATAG 696 0.3994 MNNGISSYVLVAYRNITACLFFSHLQHIMKGVIVVTFVKGLVLFGTVGANIRSNHHDGFHAILGSVFILLSTLSSAVSNILRNITLSQLNLPLTVTSLICLFVSIEAVVVAVVMNKKISYSVWSIFDWDVKLLSALYAGIFCSGIGFYLRGQVMQARGPVFATMFNPVCMILVAMSGYFFLDEQQLLGRVIGSLIICWGLYCVVWGKNKDNNLRRQENANAVANSITVENP 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02939 231 Pfam EamA-like transporter family 63 204 IPR000620 GO:0016020|GO:0016021
Tsu01g02939 231 SUPERFAMILY Multidrug resistance efflux transporter EmrE 128 209 - -
Tsu01g02939 231 PANTHER WAT1-RELATED PROTEIN 29 219 IPR030184 GO:0016021|GO:0022857
Tsu01g02939 231 PANTHER WAT1-RELATED PROTEIN 29 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02939 Tsu-Chr1 35790513 35793187 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02939 32 210 Nodulin-like Gene Family AT2G37450 46.154 5.51e-45 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02939 - - cam:101496299 191.43