Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02923 ATGGTTCGGTTTCTAAACACTCCGATTCTTGTTGATTCGCACAATCATTTGGGGAAATGGACTTCTGGGGAGGATCTCACAGTTGTTGAGACTGCATTAGGCCATGAAAGTTATTGGGATTTCATTCATCAAGATTCTGCATACTTGAGTACTTTTAATGAGGCCATGGAAAGTGATTCTCATGTTGTGAGGTTGGCTTTGAGAGATTGTAGATCTGTTTTTGAAGGGATTGGTTCGTTGGTCGATGTTGGTGGTGGAACTGGAAACACAGCTAAGATTATATGTGAGGCGTTTCCGGAGCTCAAGTACATTGTCTTGGACCTTCCACAGGTTGTTTCTGGTTTATCAGGAAGCAATAACTTGAGCTTTGTTGGCGGGAACATGTTTAAGTCTATCCCTCAAGCCGATGCTATTTTGCTCAAGTGGGTGTTACACAATTGGAGCGATGACGATTGCATAAAGATACTCAAAAATTGCAAGAAAGCTATTTCAGGAAAAGGGAAAGGAGGAAAAGTAATCATCATAGATGTAGTCATAAATGAAAATCAAGATGAGCATGAAATGACAGAAGTAAAACTTTTACTTGATGTGGTTATGATGACCAGCCTCAatggaaaagagagaaatgaaaAGGAATGGAAACAACTTTTCTTACAAGCTGGCTTCAAATCTTACAAGATATTCCCCGCGTTTGGTTTTAGGTCTCTTATTGAGCTTTATCCTTAA 726 0.3871 MVRFLNTPILVDSHNHLGKWTSGEDLTVVETALGHESYWDFIHQDSAYLSTFNEAMESDSHVVRLALRDCRSVFEGIGSLVDVGGGTGNTAKIICEAFPELKYIVLDLPQVVSGLSGSNNLSFVGGNMFKSIPQADAILLKWVLHNWSDDDCIKILKNCKKAISGKGKGGKVIIIDVVINENQDEHEMTEVKLLLDVVMMTSLNGKERNEKEWKQLFLQAGFKSYKIFPAFGFRSLIELYP 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02923 241 CDD AdoMet_MTases 80 179 - -
Tsu01g02923 241 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 241 IPR016461 GO:0008168
Tsu01g02923 241 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 6 239 IPR029063 -
Tsu01g02923 241 Pfam O-methyltransferase domain 28 223 IPR001077 GO:0008171
Tsu01g02923 241 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 1 240 - -
Tsu01g02923 241 Gene3D Vaccinia Virus protein VP39 1 241 IPR029063 -
Tsu01g02923 241 PANTHER O-METHYLTRANSFERASE 1 240 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02923 Tsu-Chr1 35643272 35644129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02923 37 239 Monolignol Biosynthesis Gene Families AT5G54160 38.537 1.93e-41 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02923 K22588 - gmx:100818947 311.612