Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02877 ATGACCATCTCAATGTCCATGTGCAGACTAATTAGACAACCCTTAATAAGCAATGTTCCATGTAGTGGCCAAAAACTCAACATGAGACAAATTCAAAAGGAAAATGTAGTTTTGGTCATGGGTTCAACAGGAACAGGAAAGTCAAAGCTTTCAATTGACTTAGCAAATTATTTCCCATCAGAAATAATCAATTCAGACAAAATTCAAATCTATGAAGGTCTTGACTTAGTGacaaacaaaatcacaaaagaagaacaaaaaggAATACCACACCATTTACTAGGAACACATAACCCCAACATAGAGTTCACTTCTAACGATTTTCGCGAAAAATCAACTTCGGCCATTGATTCAATCACGGGCCGCGAACATCTTCCAATCATTGTTGGTGGCTCGAATTCCTACCTCGAAGCCTTAGTTGATGATGACGACTATAATTTTCGATCGAGGTACAATTTTTGTTGTCTCTGGGTCGATGTATCAATGCCAATTCTTCATTCGTACATAGATCAACGCGTTGATCAAATGTTTAATAGTGGAATGGTTAATGAGTTGCGACCCTTTTATAATCCGAACGGGGATTACTCAAAAGGGATACGAAAAGCCATTGGTGTTCCCGAATTCGATGAGTATTTTCGAAAGGAAAGTTTTGTAGACGAcgaaacaaataaaatgttgCTTGAAAAAGCTTTGAGTGAAATGAAGATGAATACATGGAAATTAGCTAGGAAACAACTGGGAAAAATTAATTGGCTTAAGAATGTTAAGAGATGGAATATTCATAGGTTAGATGCTACACCTGTTTTTGAGAAGCACGGAAAAGAAGCTGATGAAACATGGAAGAAGATTGTGGCAGAACCTAGTGCAATGATTGTGGCACAATTTTTATATAACTCGAGAAATTCTGCTAAT 912 0.3531 MTISMSMCRLIRQPLISNVPCSGQKLNMRQIQKENVVLVMGSTGTGKSKLSIDLANYFPSEIINSDKIQIYEGLDLVTNKITKEEQKGIPHHLLGTHNPNIEFTSNDFREKSTSAIDSITGREHLPIIVGGSNSYLEALVDDDDYNFRSRYNFCCLWVDVSMPILHSYIDQRVDQMFNSGMVNELRPFYNPNGDYSKGIRKAIGVPEFDEYFRKESFVDDETNKMLLEKALSEMKMNTWKLARKQLGKINWLKNVKRWNIHRLDATPVFEKHGKEADETWKKIVAEPSAMIVAQFLYNSRNSAN 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02877 304 Pfam IPP transferase 148 246 - -
Tsu01g02877 304 Pfam IPP transferase 69 142 - -
Tsu01g02877 304 Gene3D - 33 296 IPR027417 -
Tsu01g02877 304 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 27 300 - -
Tsu01g02877 304 CDD NK 36 88 - -
Tsu01g02877 304 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 162 260 - -
Tsu01g02877 304 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 145 IPR027417 -
Tsu01g02877 304 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 27 300 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02877 Tsu-Chr1 34620869 34622303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02877 149 303 C2H2 Transcription Factor Family AT2G27760 30.220 3.18e-23 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02877 K10760 - gmx:100803964 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02877 01 34620869 34622303 Tsu01g02877 01 34620869 34622303 ECH