Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02847 ATGTCAAGTACCACTAGAAATCTGAGGAACCTTGGCCTCTGCTTTTCAAATTCCATTCCTCAATCAAAGTCTCCACCTACAAGTCCCACTCCTACCACTACTAGTGCAGCTTCCTCACATCATCAAATTCATGACAAACCTTCTTCATCTACATCTTCCACATCAATTATGATCAAGAACTTCAACTCTCTCTATGACCCTTCTTCCTTAACCTCTTCTAACCACACTTTATGCTCTTCTTCACACTCTACCACTTTCACCACATCCACTTCTTTCGAAATCGAACCCGAACTCGAGCCAGTGGACTTCGCAGCAGCCTTTGCATCTCAAcgcttcttcttctcctccCCCGGAAGCTCCAACTCACTAATCGAATACACAAACACAAATACCACCCAACATTCTTCGGTACCATTTACAGATAAGTCCAATAGTGTTAAGCGTGAGAAGAAAGAGAAGATAGAGAAAGAGGAGGTTTTGTTCAACGGAAGTGTGGCGGTGCCAACCTACTCTCCCGACCCTTATACAGATTTCAGGAGGTCGATGCAAGAGATGGTGGAGGCACGGCCCGAGTTGATGGATGTGAAATCAAATTGGAATATCTTACATGAGTTGCTTCTATGTTACCTTGCTCTCAACCCAAAGAACACTCACAAGTACATTCTCGGTGCTTTCGCGGATCTCCTCGTTACACTCATGTCATTCTAG 708 0.4308 MSSTTRNLRNLGLCFSNSIPQSKSPPTSPTPTTTSAASSHHQIHDKPSSSTSSTSIMIKNFNSLYDPSSLTSSNHTLCSSSHSTTFTTSTSFEIEPELEPVDFAAAFASQRFFFSSPGSSNSLIEYTNTNTTQHSSVPFTDKSNSVKREKKEKIEKEEVLFNGSVAVPTYSPDPYTDFRRSMQEMVEARPELMDVKSNWNILHELLLCYLALNPKNTHKYILGAFADLLVTLMSF 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02847 235 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 165 233 IPR006458 -
Tsu01g02847 235 PANTHER TRANSCRIPTION REPRESSOR OFP12 8 234 - -
Tsu01g02847 235 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 8 234 IPR038933 GO:0045892
Tsu01g02847 235 MobiDBLite consensus disorder prediction 15 53 - -
Tsu01g02847 235 Pfam Transcriptional repressor, ovate 171 232 IPR006458 -
Tsu01g02847 235 ProSiteProfiles OVATE domain profile. 167 231 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02847 Tsu-Chr1 34161408 34162115 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Tsu01g02847 Ovate 1.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02847 - - aprc:113871147 244.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03594 07 42114035 42114586 Tsu01g02847 01 34161408 34162115 PCT