Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02836 ATGCCAAGGAAATTTCCATCAACTAAGAATGCAGTTGATTATTGCCATAGTAGAGGCGTGTATCACAGAGATTTGAAGCCAGAGAATCTTCTTTTGGACAATAATGGTGTTCTTAAAATTACATATTTTGGATTAAGTACATACTCACAACAGGAAAACCTCGTGAGAGAGACTACAGAAAAACCCGTATCGATGAATGCTTTTGAGCTTATTTCTAGATCTGAAAGCTTCAATCTTGGTAATATGTTTGAGATGGAGCAAAAGGGTGTTGTAAAGCGCGAATCACATTTCACTTCACAGTGCCCCCCAAATGAAATTATGTCTAAAATTGAGGAGGCTGCTAAACCTCTCGGATTTAACGTTCACAAGCGAGATTACAAGatgaagctgcaaggtGATAAAAGTGGAAGGAAGGGTCACCTTTCAGTGGCTACTGAGGGGGTGTTCTACAGAGATGGAAGTATTTCGAATTCCTTTACCTCTGCAATATTCTATCACTCTTTCACTGGAAAACTGGGTGCCATTGTCTGA 531 0.3842 MPRKFPSTKNAVDYCHSRGVYHRDLKPENLLLDNNGVLKITYFGLSTYSQQENLVRETTEKPVSMNAFELISRSESFNLGNMFEMEQKGVVKRESHFTSQCPPNEIMSKIEEAAKPLGFNVHKRDYKMKLQGDKSGRKGHLSVATEGVFYRDGSISNSFTSAIFYHSFTGKLGAIV 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02836 176 CDD CIPK_C 66 146 - -
Tsu01g02836 176 Pfam Protein kinase domain 9 54 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g02836 176 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 50 146 - -
Tsu01g02836 176 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 8 51 - -
Tsu01g02836 176 ProSitePatterns Serine/Threonine protein kinases active-site signature. 20 32 IPR008271 GO:0004672|GO:0006468
Tsu01g02836 176 ProSiteProfiles NAF domain profile. 60 84 IPR018451 GO:0007165
Tsu01g02836 176 ProSiteProfiles Protein kinase domain profile. 1 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g02836 176 Pfam NAF domain 62 123 IPR004041 GO:0007165
Tsu01g02836 176 PANTHER - 50 146 - -
Tsu01g02836 176 PANTHER - 8 51 - -
Tsu01g02836 176 Gene3D Transferase(Phosphotransferase) domain 1 7 63 - -
Tsu01g02836 176 SUPERFAMILY Protein kinase-like (PK-like) 10 53 IPR011009 -
Tsu01g02836 176 Gene3D Kinase associated domain 1, KA1 64 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02836 Tsu-Chr1 33977251 33979535 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02836 3 57 CBL-interacting serine-threonine protein kinases AT1G01140 70.909 1.22e-19 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Tsu01g02836 NAF 1.3e-21 CL0573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02836 - - gmx:100794136 159.458