Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02812 ATGATACCGAGTGTCGGCATGGAATTTGATGGCGTTGATGCGGCTTGGCAATTTTGGGTTGATTATGGTAAGAAATATGGTTTTGGAGTTAGAAAGCATTACTtgaacaaaagaaaatcaaatggCTTGATTACATCCTGCAAATTTGTTTGTTGCAAAGAGGGTAGTAAATTGAAAGACAAAAGATCCTTTTTGGTTAAGAAGCCTAGAGCTGAAACAAGATCAGAGTGCAAGGCAAGCATTTCACTTAGTTTAAAAAATGGGAAGTTTGTAATACAAGATTTTGTGGAAACTCACAACCATCTTTTACAACACGCGGGAACAACACACATGCTAGCATCACATCGTAAAATATCGGAAGTTCAAGCATATGAGATCGAAATGGCAGAGGACTCTGGCCTAAAGCAAAAGGCTTCATTTCAACTTATGAGCACACATGCAGGAGGTAGAACCAATCTCGGATTTACACGATTGGATGTCAAAAACTATCTTCAAGCAAAAAGGCAGCATGACATGGTGCATGGGGATCTTGGTAGTCTTATGCAGTATTTTCAACGTCAAATGTTGGACAATCCATCATTTTACCACGCATATCAAATGGATTGTGAAGAACAAATCACAAACATATTTTGGGCTGATGCAAAAATGATCTTGGATTATGGATATTTTGGTGACGTGGTTTCTTTAGATACAACATATTGCACTAACCGTGCTAATCGACCACTTGcattattttcaagatttaACCATTATAGGGGCACACTTATTTTTGGAGCTGCACTATTATATGATGAAACTGCTGAATCATTCAAGTGGCTATTTGAAACATTTCTCGAAGCACATGGTAGTAAAAAGCCTCAAACAATGTTCACTGACCAAGCCCCTGCAATGGCTAAAGCACTAGCTAAGGTAATGCCAGAGACTAAACATGGGTTATGCGGCATTTGA 948 0.3755 MIPSVGMEFDGVDAAWQFWVDYGKKYGFGVRKHYLNKRKSNGLITSCKFVCCKEGSKLKDKRSFLVKKPRAETRSECKASISLSLKNGKFVIQDFVETHNHLLQHAGTTHMLASHRKISEVQAYEIEMAEDSGLKQKASFQLMSTHAGGRTNLGFTRLDVKNYLQAKRQHDMVHGDLGSLMQYFQRQMLDNPSFYHAYQMDCEEQITNIFWADAKMILDYGYFGDVVSLDTTYCTNRANRPLALFSRFNHYRGTLIFGAALLYDETAESFKWLFETFLEAHGSKKPQTMFTDQAPAMAKALAKVMPETKHGLCGI 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02812 315 PANTHER OS03G0181600 PROTEIN 1 313 - -
Tsu01g02812 315 Pfam MULE transposase domain 226 313 IPR018289 -
Tsu01g02812 315 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 313 IPR031052 GO:0006355
Tsu01g02812 315 Pfam FAR1 DNA-binding domain 17 104 IPR004330 -
Tsu01g02812 315 ProSiteProfiles YDG domain profile. 1 37 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02812 Tsu-Chr1 33541466 33542413 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu01g02812 MULE 1.1e-20 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02812 - - cam:101505629 460.685