Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02802 ATGGGTTTGAATGGAACGAGATTTGTTAAGAATGGAACTCGATTTGTTAAGAATGGAAGGATTTGCGAACGAGATTTTGATGAGGGAGGAGATTTTCATCGAGGCATGGTGAAGAGTATGCTGCGGAAAAATCCCGAGCTTAGGCCAAGTGCTGCAGAGCTACTAAATCATCCTCGTCTTCAACCTTATATACTTAAAGTTCATTTGAAACTAAATAACCCTAGAAGAAGTACTTTTCCATTCCGTTGGACAGACACAAACCATGCTAGGAGAAGTCAATTTGTAGAACCAGAATCTGTTTCCACTCTCTCTGGCAGAGTTAAACGATTGTCATTCAGTAATGATAGGGCGTTGAATCCTAGTATTTCTGGAACTGAAGCAGGTTCTCTTTGTTCTACTCAAAGAACACAAGGTTTCTCTACTTGTTCAAAACATCATGAACTATCCATTGGTTGTGTCTGTGAAGAACGCAATGATAACAAATCAGAAGGCACCAAACTATCAATTGTTGATTGTATGCAAAGACTGAGAGCAGCTAATGAGTCTGCCATCCCTCGGAGACAGACAACACCATCAAAGATAGCACATACTAGTTCCAAGCGTGATTCACTTCCAGCATCTTCTACTCCAGCTGGTAAATTTACATCACCATCTCGTAGAGCTTCCCTTCCCCTTCCTACAAGATCCAAGGCCACGACTACCCCTTACCGAGCCAACATCGGTCTTCTTCGAAGTGTAGACTCTCCTGACATTTCTGTTAATGCGCCACGGATTGACAAGATGGCTGAGTTTTCATTGGCCCCAGGTGAAGATCATCCTCTCTTCCCTGTGCGCGGAACATCATCAACATCAGCTCAGTGCTCTTCTAGTACCCAAAGGAGTGTTGCTGCTGCTGCCGACTACTCAATAACAAAGGACAAGTGTACAATCCAGGTTGTGGACAAATCCAATGTCCCTTCCAGTGGTGCTCTAGTTTCATATGGCAATGAATGCTCCCAACACGTTGCAACTGCTGTTTCAAGTCATTCCTCTGCTAATTCTCATCAGCGTAAGTTTGACACCTCATCTTACCAGCAACGAGCGGAGGCATTGGAAGGGTTGCTCGAGTTCAGTGCTCGGCTCCTACAACAACAGAGATTTGAAGAGCTTGAGGTGTTGTTGAAGCCATTCGGGCCTGAGAAGGTTTCTCCGAGGGAAACAGCCATTTGGTTGACAAGGAGCTTTAAAGAAACCGTGGTTTAA 1242 0.4436 MGLNGTRFVKNGTRFVKNGRICERDFDEGGDFHRGMVKSMLRKNPELRPSAAELLNHPRLQPYILKVHLKLNNPRRSTFPFRWTDTNHARRSQFVEPESVSTLSGRVKRLSFSNDRALNPSISGTEAGSLCSTQRTQGFSTCSKHHELSIGCVCEERNDNKSEGTKLSIVDCMQRLRAANESAIPRRQTTPSKIAHTSSKRDSLPASSTPAGKFTSPSRRASLPLPTRSKATTTPYRANIGLLRSVDSPDISVNAPRIDKMAEFSLAPGEDHPLFPVRGTSSTSAQCSSSTQRSVAAAADYSITKDKCTIQVVDKSNVPSSGALVSYGNECSQHVATAVSSHSSANSHQRKFDTSSYQQRAEALEGLLEFSARLLQQQRFEELEVLLKPFGPEKVSPRETAIWLTRSFKETVV 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02802 413 PANTHER SERINE/THREONINE-KINASE NEK4 33 402 - -
Tsu01g02802 413 MobiDBLite consensus disorder prediction 181 232 - -
Tsu01g02802 413 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 33 402 - -
Tsu01g02802 413 MobiDBLite consensus disorder prediction 183 232 - -
Tsu01g02802 413 SUPERFAMILY Protein kinase-like (PK-like) 33 101 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02802 Tsu-Chr1 33380970 33384103 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02802 K08857 - gmx:100810347 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02802 01 33380970 33384103 Tsu01g02802 01 33380970 33384103 ECH
Tsu07g03614 07 42316378 42321139 Tsu01g02802 01 33380970 33384103 PCT