Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02771 ATGAAGATCAAGGAAAGAAGAAGTTCTATAGAAGCTAAGAATGTTGAAAATGTTGTCAAGTATGAAGTTGACATGGCAATGATTTTTTCATCTCAAGGTTTTGCTTGGAGTAATGCTTTAAAATTGAAGCTTCAAAAAGATGGTGGTGATGGTTCATCAAGAattaattatcaacaaaatGATATGGGCCGCCCACTTGATTTTTCTaagaaaaattgttcaaaatttgAGGCTAGTAAGATtttggtggaaaaaaaattggttgaagAAAATTATTATGATGAAGATGACATTGTGGATGACCAATTGAGGTGTCTTAGAAAATTGATTCCAGGAGAAGAGATTATGTGTGATGAACAAATGGTGAGTGAATTAGAGAGCTATGTAAGTTGTTTGCAAATGCAGGTAAATATTCTAAAGTGTCTCACTGATTAG 435 0.2943 MKIKERRSSIEAKNVENVVKYEVDMAMIFSSQGFAWSNALKLKLQKDGGDGSSRINYQQNDMGRPLDFSKKNCSKFEASKILVEKKLVEENYYDEDDIVDDQLRCLRKLIPGEEIMCDEQMVSELESYVSCLQMQVNILKCLTD 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02771 144 PANTHER TRANSCRIPTION FACTOR BHLH146 1 143 - -
Tsu01g02771 144 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 1 143 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02771 Tsu-Chr1 32608316 32608750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02771 18 143 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 31.746 1.43e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02771 - - aprc:113852314 135.961