Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02761 ATGAATTTGAAGAAAAGTTATTGTGAGTATTTTGCTGCTGGTGTTTACTGCATAGAGCCTTGCTCCTGTCAAGAATGCTTCGACAAACCTATTCATGAAGATATTGGTCTTATTATATCATGTGAAGAAGAAAAGTTTGAGGATGGAAGATATGAAGTCTCTAGGAAGAAGTTTGATAGTGATTTAAAGTACtttcatgatgatgatgatgaagttttGAGGCAGGTTGTCCAAATGTCACTACAAGGATTGTTAGTCCAATGTGTATTTGCAAGGATTGTATTTGAGGATTTTCAGCATATCAAAAAGAATTCCAAAGCTGGATTGATGAGAAGTGTAGTTGGGAGCTGTTATGgagatgaactttttttttag 375 0.3173 MNLKKSYCEYFAAGVYCIEPCSCQECFDKPIHEDIGLIISCEEEKFEDGRYEVSRKKFDSDLKYFHDDDDEVLRQVVQMSLQGLLVQCVFARIVFEDFQHIKKNSKAGLMRSVVGSCYGDELFF 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02761 124 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 5 35 IPR044522 GO:0003700
Tsu01g02761 124 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 5 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02761 Tsu-Chr1 32274111 32275940 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02761 5 37 CPP Transcription Factor Family AT4G14770 78.788 1.11e-13 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Tsu01g02761 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02761 - - mtr:MTR_5g006530 66.6254