Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02759 ATGAGTGAACCTCTTTGTTCCTCCGATGAACCCAATATCAACACAACTATTTTTGCTCAAGAGAACATgaactcatcatcaattccgGTAGTCGATTGTGTCGATAAATGGGTGAACAATATACATGGGCAAGAAAGTATTGTCGATAGCGAACCACACTTGGGAATGAAGTTTGACTCTGAGGAAACAGCTTATGATTTTTATAATGAGTACAGTAAAAACATTGGATTTGGTATTCGTAGAGAATATGTAAACAAAAGCAAAAAGGATGGAGTTTTAACTTCAAGAAAATTCACATGCTTCAAAGAGGGTATGCGAGGTGTTGACAAAAGACGTCAGCCGACTGGGGAGCGCCTTAGAGCATAA 366 0.3661 MSEPLCSSDEPNINTTIFAQENMNSSSIPVVDCVDKWVNNIHGQESIVDSEPHLGMKFDSEETAYDFYNEYSKNIGFGIRREYVNKSKKDGVLTSRKFTCFKEGMRGVDKRRQPTGERLRA 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02759 121 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 31 113 - -
Tsu01g02759 121 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 31 113 - -
Tsu01g02759 121 Pfam FAR1 DNA-binding domain 66 112 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02759 Tsu-Chr1 32258767 32259556 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu01g02759 FAR1 9.7e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02759 - K17604 cam:101493633 158.688