Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02703 ATGGAAGGGGAAAGTTCAAAGGAGAAGAATGACAAACAAGAATCACCAAAAGAAATCCGATATCGAGGAGTGAGGCGGCGTCCATGGGGAAAATATGCGGCCGAGATTCGCGACCCAGCTCGGCAAGGTGCCCGTGTGTGGCTAGGGACATTTCTCACGGCGGAGGAAGCTGCGAGAGCTTATGATCGTGCCGCCTTTGAAATGAGAGGTGCTTTAGCCATTCTCAATTTTCCACATGAGTATCCATTTCTCAActcctcttcatcatcatcattagcACCTAATCCACATTCATCTTCTAACTCTGAATCATTATTGCCTTCAAATTACCAAAATGAGCATGGAAAACAAGTCATTGAGTTTGAATGTTTGGATGACAAATTGTTAGAGGAACTTCTTGATTGTGATGAGAGTGAAACTACCACTTACAAAAACTTGCCAAAGTAA 447 0.4116 MEGESSKEKNDKQESPKEIRYRGVRRRPWGKYAAEIRDPARQGARVWLGTFLTAEEAARAYDRAAFEMRGALAILNFPHEYPFLNSSSSSSLAPNPHSSSNSESLLPSNYQNEHGKQVIEFECLDDKLLEELLDCDESETTTYKNLPK 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02703 148 ProSiteProfiles AP2/ERF domain profile. 20 78 IPR001471 GO:0003700|GO:0006355
Tsu01g02703 148 SUPERFAMILY DNA-binding domain 20 80 IPR016177 GO:0003677
Tsu01g02703 148 CDD AP2 20 79 IPR001471 GO:0003700|GO:0006355
Tsu01g02703 148 SMART rav1_2 20 84 IPR001471 GO:0003700|GO:0006355
Tsu01g02703 148 MobiDBLite consensus disorder prediction 1 22 - -
Tsu01g02703 148 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Tsu01g02703 148 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Tsu01g02703 148 Pfam AP2 domain 20 70 IPR001471 GO:0003700|GO:0006355
Tsu01g02703 148 PANTHER DNA-BINDING DOMAIN 10 137 IPR044808 GO:0003700|GO:0009873
Tsu01g02703 148 MobiDBLite consensus disorder prediction 86 111 - -
Tsu01g02703 148 Gene3D AP2/ERF domain 19 79 IPR036955 GO:0003700|GO:0006355
Tsu01g02703 148 PANTHER ETHYLENE RESPONSE FACTOR 10 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02703 Tsu-Chr1 30651682 30652128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02703 17 137 AP2-EREBP Transcription Factor Family AT3G23230 61.290 3.37e-43 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tsu01g02703 AP2 9.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02703 - - gmx:100810414 148.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03665 07 42881824 42882261 Tsu01g02703 01 30651682 30652128 PCT