Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02682 ATGCGGATCACACAACGTGCCCGTTTGGCTGCTAGTATATATAAAAGAAAAACTGAAATTCGAAGAAAATACATTTACCGGAATCTCATCTTCGCTGTCTTCTCGGTATGTTTGATTTCTCAGGGTTTGACATTCACTAATCCACTTGacgAGAGACTAAATCTTAGAGCAGCCCCTAATAACTTTCATCAGCTGAAGTTACCCCATAAAGCATTTGATGTTGTTCGAATTTGTAAAGAGGACCAAGACCTGATCTTTAAGATGCTTGCTGCGATATTATGGCTGGGAAATATATCATCCAAAGTTATTGACAGTGGAAATCACATTGGAGTTATGAGTGATGAAGGCAATTGA 354 0.3814 MRITQRARLAASIYKRKTEIRRKYIYRNLIFAVFSVCLISQGLTFTNPLDERLNLRAAPNNFHQLKLPHKAFDVVRICKEDQDLIFKMLAAILWLGNISSKVIDSGNHIGVMSDEGN 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02682 117 PANTHER MYOSIN 60 114 - -
Tsu01g02682 117 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 113 IPR027417 -
Tsu01g02682 117 PANTHER MYOSIN-2 ISOFORM X1 60 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02682 Tsu-Chr1 30423830 30431026 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02682 62 116 Myosins gene family AT5G54280 50.909 1.23e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02682 K10357 - gmx:100802614 77.4109