Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02673 ATGACAAAGCTCGCTTATTTGCATGAGCCAGGAGTGCTGTATAATTTGGAAACTCGATACAAGATCAATGAAATATATACTTATACTGGAAATATTCTTATTGCGATCAATCCCTTTCAAAATCTTCCACACCTGTATGATGCTGGTGCAATGAAAAGATACAAGGGAGAAAAAATGGGAAATTTAAGCCCACATGTTTTTGCTATTGCTGAATCAGCATATAGGGCTATGATTAATGAGGCGAAGAGCAACTCTATTCTGGTTAGTGGTGAAAGTGGTGCCGGTAAGACAGAAACCACCAAAATGCTTATGCTTTACTTAGCATATTTGGGTGGTCACACTGCATCTGAAGGACGGACTGTTGAACAACAAGTTCTAGAATCAAACCCAGTTCTTGAAGCATTTGGTAATGCAAAAACAGTTAGAAATGACAATTCTAGCCGTTTTGGAAAATTTGTTGAGATTCAATTTGATAAATACGGGAGAATATCAGGCGCAGCTATTAGAACTTATCTGCTAGAGAAGTCTCGTGTTTGCCAAATATCAGATCCGGAGCGTAATTATCACTGTTTCTACCTTCTCTGTGCTTCTCCTCCAGAGGAAAAGGAGAAATATAAGTTGGGAGATCCAAGATCATTTCATTACCTTAATCAATCCAGTTGCTATGAATTAGCTGGTGTTAATGCTGCTCAGGAGTATCTTAGCACCAAAAGAGCCATGGATATTGTGGGAATCAGTCAGGAGGAGCAGGATGCAATTTTCAGAGTTGTTGCTGCTATTCTCCATCTTGGAAACATTAGATTTGAAAAGTCAGAAGAAACAGATTCATCATTTCTAGCAGACGAAGACTCCAAGTTCCATCTCCAAACAACAGCTGAACTCATAATGTGTGATCCTAATGCCGTGGAAGTTGCACTTCGTAAGCGTGTGATGATCACCCCAGAAGAAATCATCGAAAGAAGTCTTGATCCTCTTGCCGCAACAGTTAGCAGGGATGGTTTGGCCAAGACATTATATTCTCGTTTGTTTGACTGGTTAGTCCAGAAAATTAATCTCTCCATTGGGCAGGATCCCGACTCAAAATGTCTCATTGGTGTTCTTGACATATATGGCTTTGAGAGCTTTCAAACTAATAGTTTTGAGCAGTTTTGTATTAATTTTACGAACGAAAAGCTGCAGCAGCACTTCAACCAGCACGTGTTTAAGATGGAGCAAGAGGAGTACACAAAAGAAGAGATTGATTGGAGTTACTTAGAATTTGTAGATAATCAGGATGTACTAGATCTCATTGAAAAGAAACCAGGTGGAATAGTTGCTCTGCTTGATGAGGCTTGTATGTTTCCCAAGTCAACTCATGAAACATTTTCGACAAAACTTTATCAAACATTTAAAGATCACAAACGCTTCATCAAGCCAAAATTGGCACGCTCAGACTTCACTATTGTTCATTATGCAGGCGAGGTCCAGTATCAATCAGAGCACTTCTTAGACAAAAACAAAGACTATGTTGTTCCTGAACATCAAGATATGCTAAGTAATTCCAAATGTTCATTTGTATCAGGCCTTTTTGCTCCACTTTCTGAGGAGACAGCCAAATCTGCTAAGTTTTCTTCTATTGGTTCTCGTTTTAAGCTACAATTACAACATTTGATGGAAGCACTCAATCTGACAGAGCCCCACTATATTAGATGTGTGAAGCCGAATACACTTTTAAAACCTGGGATATTTGAGAATATGAATGTCATGCATCAGTTACGTTCTGGTGGTGTTCTTGAAGCCGTGAGAATAAAATGTGCTGGATTCCCCACTCACAGGACCTTTCATGAATTTTTAACCCGAGTAGGCATTCTTGCACCCGAGATCCTTCATGGGAACTTCGAAGAAAAGGAATCGTGTAAAAAAATTTTAGAGAAGATTGGGCTGACAGGTTATCAGATagggaaaacaaaaatattcctAAGAGCTGGTCATATGGCAGAATTGGATGCTCGGAGAGCATACATGCTTAACAATTCTGCAACAATTATCCAAAAgcaaacaaaaacttattttagtCGGAAAACTTATATTGCACTGCGAGATTCCTCTATCTTTGTGCAATCTATTTGCAGAGGAGAACTGGCACGGATACAATATTATCACATGAAGAGGAAAGCAGCTGCcatcaaaattcaaacctatacACGTAGAAGATTAGCCAGAAATAACTACTTAAAATTAAGGAAGTGTGTCCTTGTCTTAAAGTCAGGTTTTCAGGCTTTGGCTGCTCGACGTGCTCGCGATATATGGCAACGTAGAAAGCAAACTAAGGCATCAACTAGTATTCAGTCCTATTGGCGGCGACATAAAGCTCTCTTTAACTATCAGAACCTTAAGAAAGCAGCACTCATTTCACAAAGTGTCAATCGCTCCAGCGATGAACATGAGCAGAAGGTTGTGGAGATATCAGTGGAAAATGAATGTCCTTCTGTGGAAGAATCATCAAATTTATTACATGAAGCATCCCCAAGTTCTTTCCAAGATAATGAAAGCATAGAAACTATTAGGGTTTTCCCTAATCCTCTCAGAGATACTGAAAACAACGAAGCTATTAGGGATTTCTCTAGTCCCCTCAGAGATGCTGAAAACAATGAAGCTATTGGGGATTTCTCTAGTCCCCTCAAAGACACTGAAAAGATTGAGGCTCTTTCTGCagaaataaaaagtttaaagGTCATGTTACaggaagaaaaacataaaactgATGAATATGAAAGGAAATATGTAGAAGCTCAAGGATCTTGCGAAGAGTTACGCAAAAAGTTAGCCGAAACTGAAAAAAGAGTATATCAGCTTCAGGAGTCATTGAACAGGATGATATCTTCCATGTCAAATCAAGTTACCGAGCTGAAGACGATCTTAAGTACTTCATCAAGATTGAGTTCAACTTTTCGACCTATTGCTAGAGTTGACGTTGCTTCCAGTAACTCTGATACTTCATCTACAGACTCTGATTTCACATTTCCAGCATCTGTCACAAATCCAGAAGCATTATCTTCTGCCGAGCCTAAACTTGTAGTTCAGGATATCACTGCAGCTGAAGGATCAGGATCtgaaagtgaaaaagaaggttCGTTTGATGATTTCTTCTAG 3132 0.3806 MTKLAYLHEPGVLYNLETRYKINEIYTYTGNILIAINPFQNLPHLYDAGAMKRYKGEKMGNLSPHVFAIAESAYRAMINEAKSNSILVSGESGAGKTETTKMLMLYLAYLGGHTASEGRTVEQQVLESNPVLEAFGNAKTVRNDNSSRFGKFVEIQFDKYGRISGAAIRTYLLEKSRVCQISDPERNYHCFYLLCASPPEEKEKYKLGDPRSFHYLNQSSCYELAGVNAAQEYLSTKRAMDIVGISQEEQDAIFRVVAAILHLGNIRFEKSEETDSSFLADEDSKFHLQTTAELIMCDPNAVEVALRKRVMITPEEIIERSLDPLAATVSRDGLAKTLYSRLFDWLVQKINLSIGQDPDSKCLIGVLDIYGFESFQTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYLEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFSTKLYQTFKDHKRFIKPKLARSDFTIVHYAGEVQYQSEHFLDKNKDYVVPEHQDMLSNSKCSFVSGLFAPLSEETAKSAKFSSIGSRFKLQLQHLMEALNLTEPHYIRCVKPNTLLKPGIFENMNVMHQLRSGGVLEAVRIKCAGFPTHRTFHEFLTRVGILAPEILHGNFEEKESCKKILEKIGLTGYQIGKTKIFLRAGHMAELDARRAYMLNNSATIIQKQTKTYFSRKTYIALRDSSIFVQSICRGELARIQYYHMKRKAAAIKIQTYTRRRLARNNYLKLRKCVLVLKSGFQALAARRARDIWQRRKQTKASTSIQSYWRRHKALFNYQNLKKAALISQSVNRSSDEHEQKVVEISVENECPSVEESSNLLHEASPSSFQDNESIETIRVFPNPLRDTENNEAIRDFSSPLRDAENNEAIGDFSSPLKDTEKIEALSAEIKSLKVMLQEEKHKTDEYERKYVEAQGSCEELRKKLAETEKRVYQLQESLNRMISSMSNQVTELKTILSTSSRLSSTFRPIARVDVASSNSDTSSTDSDFTFPASVTNPEALSSAEPKLVVQDITAAEGSGSESEKEGSFDDFF 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02673 1043 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 719 IPR027417 -
Tsu01g02673 1043 Pfam IQ calmodulin-binding motif 769 784 IPR000048 GO:0005515
Tsu01g02673 1043 Pfam IQ calmodulin-binding motif 719 737 IPR000048 GO:0005515
Tsu01g02673 1043 Gene3D - 668 721 - -
Tsu01g02673 1043 ProSiteProfiles Myosin motor domain profile. 1 666 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tsu01g02673 1043 SMART iq_5 767 789 IPR000048 GO:0005515
Tsu01g02673 1043 SMART iq_5 668 690 IPR000048 GO:0005515
Tsu01g02673 1043 SMART iq_5 691 713 IPR000048 GO:0005515
Tsu01g02673 1043 SMART iq_5 716 738 IPR000048 GO:0005515
Tsu01g02673 1043 Gene3D Kinesin motor domain 1 596 IPR036961 -
Tsu01g02673 1043 Pfam Myosin head (motor domain) 1 654 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tsu01g02673 1043 Gene3D - 600 667 - -
Tsu01g02673 1043 ProSiteProfiles IQ motif profile. 717 742 IPR000048 GO:0005515
Tsu01g02673 1043 CDD MYSc_Myo11 10 654 IPR036018 -
Tsu01g02673 1043 ProSiteProfiles IQ motif profile. 768 794 IPR000048 GO:0005515
Tsu01g02673 1043 PANTHER MYOSIN 1 984 - -
Tsu01g02673 1043 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 719 803 IPR027417 -
Tsu01g02673 1043 Coils Coil 893 948 - -
Tsu01g02673 1043 MobiDBLite consensus disorder prediction 986 1043 - -
Tsu01g02673 1043 MobiDBLite consensus disorder prediction 986 1011 - -
Tsu01g02673 1043 Gene3D - 884 978 - -
Tsu01g02673 1043 ProSiteProfiles IQ motif profile. 692 721 IPR000048 GO:0005515
Tsu01g02673 1043 PANTHER MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN 1 984 - -
Tsu01g02673 1043 SMART MYSc_2a 1 667 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tsu01g02673 1043 Gene3D - 373 557 - -
Tsu01g02673 1043 PRINTS Myosin heavy chain signature 26 45 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tsu01g02673 1043 PRINTS Myosin heavy chain signature 416 444 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tsu01g02673 1043 PRINTS Myosin heavy chain signature 363 391 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tsu01g02673 1043 PRINTS Myosin heavy chain signature 83 108 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tsu01g02673 1043 PRINTS Myosin heavy chain signature 130 157 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tsu01g02673 1043 Gene3D Myosin VI head, motor domain, U50 subdomain 246 535 - -
Tsu01g02673 1043 Gene3D - 186 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02673 Tsu-Chr1 30286367 30304906 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02673 1 966 Myosins gene family AT1G54560 62.840 0.0 1281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02673 K10357 - gmx:100803485 1624.76