Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02665 ATGGAAGAGGTTGAACAAGCTAACAAAACAGCTGTTGAAAGCTGTCATAGAGTTTTGAGTATGTTATGTCAACCAAGGGATCAAGTTCATCATAGGAATTTAATGGTGGAAACTGGTGAAGCTGTGAATAGGTTCAAGAAAGTTGTGTCTTTGCTTCATAAAGGTTTGGGTCATGCAAGAGTTAGGAAGAGTAAAAATCATCAACAAGTCCCTTTTCCTCAAAATGTTTTCTTAGACAATCCAAATTGCAAAAAAACCATCAACCATCAAACCAAAAATCTTCACTTTACTCCAACTAGCTACCCTGAAAATTCAGTTCAGGAACTTGGTTTAACCATAAGAAATCCACTCTCTCTTGGAAACCCTTCTTTGGAATTGAGCTCGAATGGGAAAAGTCCTCTTCACCTTGCTCAACCGGCTGCGTCATCTCACTATCACTTCATTCAGcagcaacaacagcaacaaagGTTTTTGCTGCATCAGCATCAACAACAGCATCAGCAACAGCAGCAACAAATGAAGCATCAAGCTGAAATGATGTTCCGAAGGAACACTAGCGGCATAAACCTTAATTTTGACAACACCACTAGCGGCACACCAACAATGTCGTCTAATAGGTCTTTCATTTCGTCATTGAGCATAGACGGAAGCGTAGCTAACATGGACGGAAGTTCATTCCATTTGATAGGAGCTCCAATCTCTTCAGATCAGAATTCACAACAGCACAAGAGAAAATGTTCTGCAAGAGGCGATGAGGGAAGTCTGAAATGTGGTAGCAGTTCTAAATGCCATTGCTCAAAGAAGAGGAAGCATAGAGTGAAGAGATCAATTAAGGTGCCTGCAATCAGCAACAAGCTTGCAGATATCCCTCCTGATGATTATTCATGGAGGAAGTATGGGCAGAAGCCGATCAAGGGCTCTCCTCACCCTAGGGGATATTACAAGTGCAGCAGCATGAGAGGCTGCCCTGCTAGGAAGCATGTCGAGAGGTGCTTGGAAGAGCCTACTATGCTAATTGTTACCTATGAAGGTGATCATAACCACCCCAAGGTACCAACACAATCTGCAAATGCATGA 1077 0.416 MEEVEQANKTAVESCHRVLSMLCQPRDQVHHRNLMVETGEAVNRFKKVVSLLHKGLGHARVRKSKNHQQVPFPQNVFLDNPNCKKTINHQTKNLHFTPTSYPENSVQELGLTIRNPLSLGNPSLELSSNGKSPLHLAQPAASSHYHFIQQQQQQQRFLLHQHQQQHQQQQQQMKHQAEMMFRRNTSGINLNFDNTTSGTPTMSSNRSFISSLSIDGSVANMDGSSFHLIGAPISSDQNSQQHKRKCSARGDEGSLKCGSSSKCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPTMLIVTYEGDHNHPKVPTQSANA 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02665 358 SUPERFAMILY WRKY DNA-binding domain 288 350 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu01g02665 358 Pfam Plant zinc cluster domain 243 288 IPR018872 -
Tsu01g02665 358 PANTHER WRKY DNA-BINDING PROTEIN 21-RELATED 2 357 - -
Tsu01g02665 358 Pfam WRKY DNA -binding domain 292 349 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu01g02665 358 SMART WRKY_cls 290 350 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu01g02665 358 MobiDBLite consensus disorder prediction 232 253 - -
Tsu01g02665 358 Gene3D WRKY domain 277 352 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu01g02665 358 Coils Coil 159 179 - -
Tsu01g02665 358 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 357 IPR044810 GO:0003700
Tsu01g02665 358 Coils Coil 357 358 - -
Tsu01g02665 358 ProSiteProfiles WRKY domain profile. 285 351 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02665 Tsu-Chr1 30167753 30170539 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02665 1 355 WRKY Transcription Factor Family AT2G30590 56.623 3.37e-120 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu01g02665 WRKY 1.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02665 - - gmx:100170681 542.732