Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02661 ATGGAAGCTAACCGCCAATCAGAGAATGATGTTGGTTTTGAGGATTTGGTTGGTGATGAACAAATAGATAGTTTATTTGACAATGAGGAATACAATAGCAGTGATGGTGAAATCGGAGGTCGAATTGATGAAGAAATGAGTGATAACGAAGAAGGCAGTAAGTCTGAAGGAGAACTTGAGTTGTCGTCGACTGACAATAGTGAAGAAGAGGAATGTGATGCAGAGCCGATAAACATTAATTGCATGGCTGACATTATGAAGATTGATATGAACAACATATCGGTAGACGAAGTCGGAAGGTATAGTTTTTCTGATCTTGCGATTGCTTACAAGTTCTACTACTGGTATGGAAGAACAACTAGGTTTTCTGTGTGTAAGAGTCGTTATGTGAGGAATGTTGCTGGTGAGATTGTTCAGAAAACGTTTTTATGTTCTCGCAAAGCATATAGAGAATCTAATGCATTAACACCAGAGAAACGGAAGCGTGAGCCAAAAAATGAAATAGATGGGACTATGTGTGGTATGTTACCGGCACATAGAAAGCTGACTGAGAAGGATGTTCAGGATATTGAGAGTCATGGAAATGTTGGGATAAGACCATATCAGATGTATGGTGCAATGGCTAATTCGGCTGGGGGTTTCCACAAGCAAGACCAACTGATGTTTTTTGAGCACAAAGTTGACAATAAAAATAGGCTAGAACGACTATTTTGGTACGATGGAGAAAGTAGGAAGAACTTTGAAGTCTTCGGTGATGTTTTAGCCTTCGATGCCACTTACCGGAAGAACAAATACAATTGCCCGTTTGTTGTGTTCTCCGGTGTTAACCATCACAATCAAACCATAGTTTTTGCAACCGGTCTTGTGACAAGGGAGACTGAAGAAACGTATGTGTGGTTGTTAGAGCAATTTGCGTGTGCAATGCAAGGCAAGACCCCAATATCTGTGATCACAAACGGTGATATTGCAATGAAAAATGCTATCAGGAAAGTGTTTCCCAAAGCCCATCACCGATTATGTGTGTGGCGTCTTCTAAGAAATGCTTCGACAAATGTTGGGATACCTGATTTCATGCGGTACCTGAAGCGATGCATGTTGGGCGACATTGAGATCAACAAGTTTGAAGAGCTTTGGGGTGACATGTTAGAAAAGTTTGGTTTGGAAGACAATATGTGGATTAAAGAAATGtatgcaaaaagaaaaatgtggtCTACAGCTTACATCAGGGGATTTTTCTTTGCTGGATTAAGGACAACCTCTCGGTGTGAGGCTCTCCATAGCCACCTTCGCCAATTTGTTCATTCAAGGATCAGCCTATTTAACTTTGTTCAACAATTTCAAAGATGCCTAACTTATTTTCGATTTAGGGAAATTGAAGCTGATTTCCGCTCTAATTATGGACAACCTGTCATGCAAAGTAGTCTCCATAGTATCGAGAGATCGGCTGCTAGTCAATATACGAAGGAGATTTTCAACATGTTTAAAGTTGTTCTTAGTAAATGTATGTTGTTGAAGGTATTGGAAGTACAACAAATGTCAAGTTGTTGCATTTACAAAGTGGCGAAGTATTGTGGTAATGGTGATGCTTGGTATGTTACACATTCTACATATGCTGaggaaaaattcaaatgttCGTGTCTTAGAATGGAATCAATTGGATTGCCATGTGATCACATTGTGTGTGTTTTGGTATATCTTGACATTGATGAACTTCCTAAGTGCTTGGATTCACAAGTTGCAGCTCGATATTCTAGTTTGGTGAAGATGTCAAAGGACGTTGCTGAGTTGGTGTATGATGATTTGGATGATTACAACCGTGTTGTTGATGTTCTCCACACTGAATTAAAGCGTCTTAAAGCTAAGCAGCATGGCAAATGA 1878 0.3908 MEANRQSENDVGFEDLVGDEQIDSLFDNEEYNSSDGEIGGRIDEEMSDNEEGSKSEGELELSSTDNSEEEECDAEPININCMADIMKIDMNNISVDEVGRYSFSDLAIAYKFYYWYGRTTRFSVCKSRYVRNVAGEIVQKTFLCSRKAYRESNALTPEKRKREPKNEIDGTMCGMLPAHRKLTEKDVQDIESHGNVGIRPYQMYGAMANSAGGFHKQDQLMFFEHKVDNKNRLERLFWYDGESRKNFEVFGDVLAFDATYRKNKYNCPFVVFSGVNHHNQTIVFATGLVTRETEETYVWLLEQFACAMQGKTPISVITNGDIAMKNAIRKVFPKAHHRLCVWRLLRNASTNVGIPDFMRYLKRCMLGDIEINKFEELWGDMLEKFGLEDNMWIKEMYAKRKMWSTAYIRGFFFAGLRTTSRCEALHSHLRQFVHSRISLFNFVQQFQRCLTYFRFREIEADFRSNYGQPVMQSSLHSIERSAASQYTKEIFNMFKVVLSKCMLLKVLEVQQMSSCCIYKVAKYCGNGDAWYVTHSTYAEEKFKCSCLRMESIGLPCDHIVCVLVYLDIDELPKCLDSQVAARYSSLVKMSKDVAELVYDDLDDYNRVVDVLHTELKRLKAKQHGK 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02661 625 PANTHER OS02G0262500 PROTEIN 216 564 - -
Tsu01g02661 625 ProSiteProfiles Zinc finger SWIM-type profile. 531 567 IPR007527 GO:0008270
Tsu01g02661 625 MobiDBLite consensus disorder prediction 1 74 - -
Tsu01g02661 625 Pfam MULE transposase domain 253 347 IPR018289 -
Tsu01g02661 625 SMART 26again6 542 569 IPR006564 GO:0008270
Tsu01g02661 625 MobiDBLite consensus disorder prediction 34 58 - -
Tsu01g02661 625 Coils Coil 601 621 - -
Tsu01g02661 625 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 216 564 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02661 Tsu-Chr1 30059698 30061995 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu01g02661 MULE 1.2e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02661 - - ccaj:109791994 500.36