Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02650 ATGGCGATCGAAAAACAACAAGAGAATGAAAATTCCGGTGGAATCCAAGTCCAAGGCATGCAATTCTCCTACGACggacttcaacaacaacaaccaccgcTTTTCGTCGATTTCAACCTCCACGTCTCTCCCGGATCTCGTTGCCTCCTTGTCGGTGCCAATGGATCCGGGAAAACGACTTTGTTGAAGATTTTGGCTGGGAAGCATATGGTTGGAGGAAGAGACGTTGTGCGTGTGTTGAATTGTTCTGCTTTTCATGATACTCAGCTTGTTTGTAGTGGAGATCTTGCTTATTTGGGTGGATCTTGGAGTAAAAACGTTGGCTGTGCTGGAGACATTCCACTCCAGGGAGACTTCTCTGCTGAACATATGATATTTGGTGTCGAAGGCGTTGATCCTGACAGGAGAGACAAGTTGATTGACCTGCTTGATATAGATCTGCAGTGGCGAATGCATAAGGTATCCGATGGCCAGCGGCGTCGAGTGCAAATCTGTCTAGGTCTTCTTCATCCGTACAAGGTTCTCTTGCTGGATGAGGTTACAGTTGACCTGGATGTTGTTACTCGAATGGATTTATTGGAATTCTTCAAGGAAGAATGTGAACAGAGAGAAGCTACAATTGTATATGCCACTCACATTTTTGATGGACTAGAGACATGGGCAACTCATTTGGCATACATACAAGAAGGCGAACTGAGGAGAGCAGAAAAAATATCAGATGTTAACGAGTTGAAATCTTCAACTAATCTGCTGTCTGTTGTTGAGTCCTGGCTCCGTGTCGAAATAAAACTTGAAAAGAAGAAACCTGTCAACAATAATACATCTCAGGCAAATCCTTTTGCTAGCTCTCCATTCTTTTCATCCAGACACATGGCATACTATCGATAA 888 0.4245 MAIEKQQENENSGGIQVQGMQFSYDGLQQQQPPLFVDFNLHVSPGSRCLLVGANGSGKTTLLKILAGKHMVGGRDVVRVLNCSAFHDTQLVCSGDLAYLGGSWSKNVGCAGDIPLQGDFSAEHMIFGVEGVDPDRRDKLIDLLDIDLQWRMHKVSDGQRRRVQICLGLLHPYKVLLLDEVTVDLDVVTRMDLLEFFKEECEQREATIVYATHIFDGLETWATHLAYIQEGELRRAEKISDVNELKSSTNLLSVVESWLRVEIKLEKKKPVNNNTSQANPFASSPFFSSRHMAYYR 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02650 295 Gene3D - 13 267 IPR027417 -
Tsu01g02650 295 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 244 IPR027417 -
Tsu01g02650 295 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 15 254 IPR003439 GO:0005524
Tsu01g02650 295 Pfam ABC transporter 37 69 IPR003439 GO:0005524
Tsu01g02650 295 PANTHER ABC TRANSPORTER I FAMILY MEMBER 21 4 295 - -
Tsu01g02650 295 PANTHER ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED 4 295 - -
Tsu01g02650 295 SMART AAA_5 44 230 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02650 Tsu-Chr1 29788936 29793697 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02650 12 288 Calmodulin-binding Proteins AT2G36910 24.399 3.35e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02650 K12608 - gmx:100788503 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02650 01 29788936 29793697 Tsu01g02650 01 29788936 29793697 ECH