Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02627 ATGGCCTCAATAGCCTTAACCACTGGTTCTCACTCCCGAAATGGACACCGTTTCTCAGTGTTTGATGACTCGGATGAGGAAAATGGAGACTTCAGTCAGCAGCAACAGAAACACAATAACCATGCTTTCTCTTTGGATGGAAGTGTAGCTAGTAAGGATTTTGAAGAGCAGAAATCATTCAGCTATAATGCAGAGAAAGAGAAAGGAAAGCAAGTAAAGAGAAGTCTTATGAGTAATGACATAGGAGAAGATGATTACCTTTTGGCTGAGTCAAGGCAACCGTTATGGCGCAAAGTCCCAATAGCTTCGAGCCTAATCAATCCATATCGCATAGTCATAGTCATGCGTCTTGTTGTCCTAGTTTTCTTCTTCCACTTCCGCATCACAACTCCGGTTCACGATGCATTCGCCTTATGGATAATCTCCGTGGTTTGTGAAATATGGCTCTCTTTGTCTTGGATAGTAGACCAGTTCCCCAAATGGTTCCCCATGACTCGCGAAACTTACTTGGAGCGCTTGTCAATGAGATTCGAGCGTGAAGGGGAGCCAAACCTTTTAGCCTCGGTTGATGTCTTTGTTACCACTGCAGACCCTTTGAAGGAACCACCTATTATAACAGCAAACACAGTTCTATCAATCTTGTCTGTTGATTATCCTGTTGACAAAGTTAGCTGCTATGTCTCCGATGACAGTGCATCTATGCTTCTCTTCGATACTTTGTCACAAACTTCTCAGTTTGCAAGAATATGGATTCCATTTTGTAAGAAGCATAATATTGAGCCAAGGGCACCTGAGTCTTATTTTTCTCAGAAAGTTGATTACTTGAAAGACAAGGTACATCCAACATTTGTAAAGGATCGCAGGGCTATGAAGagagagtatgaagaattcAAGGTGAAAATTAATGTACTTGTTGCAAAGTCTCAGAAAAAACCAGAAGAAGGGTGGGTGCTGCAAGATGGTACTCCATGGCCAGGGAACAACACTGACGATCATCCAGGAATGATTCAGGTGTGTCTGGGAAGTGCTGGTGCTCTTGACAATGAAGGCAAGGAGCTGCCACGGCTTGTGTATGTTTCGCGCGAGAAATGTTCCGGCTATCAGCACCATAACAAAGCTGGAGCCATCAATTCTCTGCTTCGAGTTTCTGCTGTGCTTAGCAATGCACCTTTTGTGTTGAATCTGGATTGTGATCAATACATCAATAATAGCAAGGCTCTTAGGGAGGCTATGTGCTTCCTAATGGACCCTCTACTTGGAAAGAAGACTGCTTATGTTCAATTTCCGCGAAGGTTTGATGGAATCGACGGAAATGACCGATATGCTAATCACAACACTGTATTCTTTGATATCAATATGAAATGCCTTGATGGGATTCAAGGTCCCGTGTATGTTGGTACTGGATGTGTGTTCAACAGGCAGGCATTATATGGCTACAAGCCACCATCTGAGAAAAGGCGAAAGACAAGCTTTTcatgctgctgctgctgttggTCTGGTGACTCTCGGTCCGCATTTGATGTTGAAAAGATTGATGATGGGCTTGAAGACTATGATGAGCAAGAGGAATCCTCCTTCATGTccatcaaagtttttgagaaaaagtttggAGAGTCACCAGTTTTCATTGCTTCTGCATTGATGGAAGATGGTGGACTTCCAAAAGGAACTAATACTCGAATACTGATGAAGGAAGCAATTCATGTTATAAGTGTTGGATATGAAGAGAAAACCGAATGGGGCAAAGAGATAGGGTGGCTTTATGGTTCAGTCACAGAAGACATTTTGACAGGGTTTAATATGCATTGTAGAGGATGGAAATCAGTGTACTGCATGCCTAAAAGAGCAGCTTTTAAAGGATCTGCTCCTATAAACCTATCAGACAGATTACACCAAGTTCTGAAATGGGCTGTGGGTTCTACTCAGATTTTTTTTAGTGGCTATTGTCCATTGTGGTATGGCTATAGTGGAAAACTGAAATGGCTTCAAAGGCTTGCTTATACGAATACTATCGTTTATCCTTTCTCTTCCATCCCTCTTCTGGTGTACTGCACAATTCCAGCTATCTGTCTTCTGACTGGAAAGTTCATCCTCCCCACTATGACAAACCTTGCAAGCATTTGGTTGATGGCTCTATTTATCTCCATCATTTTAACTTGTGTTTTAGAGCTTCGTTGGAGTAAGGTTAACATTCAAGACTGGTGGCGCAACGAACAATTCTGGGTCATTGGAGGTGTTTCTGCACATCTTTTTGCAGTGTTTCAAGGCCTCCTTAAAGTTGCAGGACTCGGCACTAATTTCACAGTGAGAACGAAATCAGCAGACGACGCTGCATTTGGTCAGCTCCATCTCTTCAAGTGGACCACTCTTCTCATCCCTCCAACAAGTATTGTAATCTTGAATATGGTTGGAATTGTGGCTGGAGTCTCTGAAGCCATTAACAGTGGCTATAACGCATGGGGACTTTTATTTGGGAAGGTTTTTTTCTCGTTCTGGGTCATTGTTCACTTGTATCCTTTCCTCAAAGGTCTACTAGGAAGACAAAACAGAACACCTATCATAGTAGTTCTCTGGGCAACACTTCTAGCATTGATTTTTTCGATGATTTGGGTGAGAATTGATGTTTTCTTGCCCAAGAAAATAGGTCCTGTACTCGCACAATGCGGGGTAGAATGCTAA 2679 0.4155 MASIALTTGSHSRNGHRFSVFDDSDEENGDFSQQQQKHNNHAFSLDGSVASKDFEEQKSFSYNAEKEKGKQVKRSLMSNDIGEDDYLLAESRQPLWRKVPIASSLINPYRIVIVMRLVVLVFFFHFRITTPVHDAFALWIISVVCEIWLSLSWIVDQFPKWFPMTRETYLERLSMRFEREGEPNLLASVDVFVTTADPLKEPPIITANTVLSILSVDYPVDKVSCYVSDDSASMLLFDTLSQTSQFARIWIPFCKKHNIEPRAPESYFSQKVDYLKDKVHPTFVKDRRAMKREYEEFKVKINVLVAKSQKKPEEGWVLQDGTPWPGNNTDDHPGMIQVCLGSAGALDNEGKELPRLVYVSREKCSGYQHHNKAGAINSLLRVSAVLSNAPFVLNLDCDQYINNSKALREAMCFLMDPLLGKKTAYVQFPRRFDGIDGNDRYANHNTVFFDINMKCLDGIQGPVYVGTGCVFNRQALYGYKPPSEKRRKTSFSCCCCCWSGDSRSAFDVEKIDDGLEDYDEQEESSFMSIKVFEKKFGESPVFIASALMEDGGLPKGTNTRILMKEAIHVISVGYEEKTEWGKEIGWLYGSVTEDILTGFNMHCRGWKSVYCMPKRAAFKGSAPINLSDRLHQVLKWAVGSTQIFFSGYCPLWYGYSGKLKWLQRLAYTNTIVYPFSSIPLLVYCTIPAICLLTGKFILPTMTNLASIWLMALFISIILTCVLELRWSKVNIQDWWRNEQFWVIGGVSAHLFAVFQGLLKVAGLGTNFTVRTKSADDAAFGQLHLFKWTTLLIPPTSIVILNMVGIVAGVSEAINSGYNAWGLLFGKVFFSFWVIVHLYPFLKGLLGRQNRTPIIVVLWATLLALIFSMIWVRIDVFLPKKIGPVLAQCGVEC 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02627 892 MobiDBLite consensus disorder prediction 1 15 - -
Tsu01g02627 892 Pfam Cellulose synthase 189 883 IPR005150 GO:0016020|GO:0016760|GO:0030244
Tsu01g02627 892 MobiDBLite consensus disorder prediction 1 37 - -
Tsu01g02627 892 SUPERFAMILY Nucleotide-diphospho-sugar transferases 344 707 IPR029044 -
Tsu01g02627 892 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 295 480 IPR029044 -
Tsu01g02627 892 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN 3 892 - -
Tsu01g02627 892 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 3 892 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02627 Tsu-Chr1 29484054 29488887 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02627 87 892 Cell Wall Biosynthesis AT5G17420 68.966 0.0 1214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02627 K10999 - gmx:100777278 1500.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02627 01 29484054 29488887 Tsu01g02627 01 29484054 29488887 ECH