Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02594 ATGGGTGGATCATCTGCGTTTTCTAGCAGCATTCTTGTTGTTTTCCAATGTTTTTCAATTTCTGAAGCTTACCAACTTGCTGACAAAATGTCAACTTCAATTATCATCTTTTTTACTTTGGTTCACTTGCTACTTTACTCTTGCTCAGCAAGGTTGATTTCTATGAGTTTGTCATTTGCTTCGTCTGAACGAGCCAAAGTGTGGTTTTTTAAACCTTCTTCTAGGCCATCTTCTGAACCTGTACTATCTCCATCCTTTGAAGGTCCTAGTGTGACTCAAGGACAGAAAAAACATCCTCATCATCACAGTCAGTCCCATCGCGTGAAACCTTATGTTGTCGCTCCCTACCCTTCTGAAAGCCAAGCATGTGGCCTAAGCTGTAGGGATCCACTCACAGAAACTCCCTTTGGTTCACCTTGTGGTTGTGTATTTCCCATGAAAGTCGGACTTTTACTGGATACAGCTTCTCTGGTTGTATTTCCGGTAGTTAATGAGTTAGAAATTGAACTTGCATCTGGAACATATTTGAAGCATAGCCAGGTGAGGATAATGGGTGTTAGTGCTGACATTCAGAATCAAGGACGAACTGTAGTTGATATTGACCTGGTTCCGCTTAGTGAGAAATTTGACAATATGACTGTGGTTCTGATATCCCGAAGATTTTGGCACAAGAAAATTCCTTTAAATCGGAGTCTTTTTGGTGATTACACACTCTTGTACATTACTTATCCAGGGATGCCACCATTTCTGCCAAATGGAACATCAACTGTGAGTGGTCCCCTTCCCAGTGGAAATGCTTCAGGTCTTCTCCCATTCACTGCCAACTTTATAGGTGGCGGCAAGAACAAGGAAATGAATCTTAGAACCATAATCATCATTGCTGTATCTTCCGTTTTAGTCTTGTTGGGCATGGTTGGAATATTTTACATCATTTATAAATGGACGAAAACCAGGAGACCATCATGTGATGTTGGCCTGCCATTCACATTTTCTGCGAACAAGAGATCTGTCGTGGGGCCTATGTTGTGTAGCAGAATGACAAGCTCAACATCAGTGTCCCATATGTCCACCATGGATACTTCTGCTCTTTCTGTGAAAACATTTTCCCTTTCTGAAATTGAGAAAGCAACAGATAGGTTCAGTTCACAAAGAGTATTGGGAGAAGGAGGATTTGGGCGTGTTTATCATGGGAGATTAAATGATGGAACTGATGTTGCAGTTAAGCTGCTAACAAGGGATATTCAGCAAAATGGAGACTCTGAATTTACTGTGGAAGTTGAGATGCTATGCCGTTTGCATCATCGTAATCTTGTGAAACTCATTGGTATATGCACAGAAGGGCACATGCGATGCTTGGTGTATGAGCTTGTTCGCAATGGCAGTGTTGAATCTCATTTGCATGGTGTTGACCAGAGAAATAACCCTCTAGATTGGGAAGCACGGAAAAAAATTGCCCTTGGAGCTGCGAGAGGATTGGCCTATCTTCATGAGGATTCTAATCCTCGTGTAATCCACCGAGACTTCAAAGCTAGCAATGTTTTGTTAGAAGATGACTTTACCCCCAAGGTTTCTGATTTTGGATTAGCAAGAGAAGCAACTGAAGGAAGTCATTCTGTTCCTACAAGGGTCATGGGGACTTTTGGGTATGTTGCCCCAGAATATGCAATGACAGGCCATTTGCTCGTTAAAAGTGATGTTTATAGTTATGGTGTTGTGCTGCTTGAACTTCTAACCGGAAGAAAGCCAGTGGACATGTTTCAACCTCTTGGAGAGGAGAATCTTGTAGTATGGGCACGGTCACTGTTGAAAAGTAGAGAGGGTTTAGAACGGCTGGTGGATCCGACATTGGCTGGAACTTATGACTTCGATGAAATGGCAAAGGTTGCTTCTATTGCTTCATTGTGTGTAAACCTGGAGGTGACTCATAGACCCTTCATGGGTGAAGTTGTGCAGGCTCTTAAGTTGATATTCAATGACAATGACGATGTCGATTACTACAGCCAGAAGGAATCTTCTGGACAAGAGTCTGATTTTAGAGGTGACCTTTCTGATAGCAGTGCGTGGTATGATGAGCCTGAAGATATAACATGTCACCTAGCTTTTAGGCCAACATTAGCATCTACCTTCATCACAATGGATTACAGTTCTGGTCCACTTGAAGTACTGGAAAACAGACAGTTTGCAGGTTCAACCTATATGGGAGATGATATGTCTTTGCCAATAAGACTTGGGAATAGATCAGGTCCCTTGAGAACAGCCCGACGAAGCAACCTATCCTTTTATAGGTTTACTGGTAATCAGAGTGATCATGGAGTATTTCCTTCCAAACACGTTTGGGATGAGGGTTTCTGGCCTTGA 2358 0.4237 MGGSSAFSSSILVVFQCFSISEAYQLADKMSTSIIIFFTLVHLLLYSCSARLISMSLSFASSERAKVWFFKPSSRPSSEPVLSPSFEGPSVTQGQKKHPHHHSQSHRVKPYVVAPYPSESQACGLSCRDPLTETPFGSPCGCVFPMKVGLLLDTASLVVFPVVNELEIELASGTYLKHSQVRIMGVSADIQNQGRTVVDIDLVPLSEKFDNMTVVLISRRFWHKKIPLNRSLFGDYTLLYITYPGMPPFLPNGTSTVSGPLPSGNASGLLPFTANFIGGGKNKEMNLRTIIIIAVSSVLVLLGMVGIFYIIYKWTKTRRPSCDVGLPFTFSANKRSVVGPMLCSRMTSSTSVSHMSTMDTSALSVKTFSLSEIEKATDRFSSQRVLGEGGFGRVYHGRLNDGTDVAVKLLTRDIQQNGDSEFTVEVEMLCRLHHRNLVKLIGICTEGHMRCLVYELVRNGSVESHLHGVDQRNNPLDWEARKKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSHSVPTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMFQPLGEENLVVWARSLLKSREGLERLVDPTLAGTYDFDEMAKVASIASLCVNLEVTHRPFMGEVVQALKLIFNDNDDVDYYSQKESSGQESDFRGDLSDSSAWYDEPEDITCHLAFRPTLASTFITMDYSSGPLEVLENRQFAGSTYMGDDMSLPIRLGNRSGPLRTARRSNLSFYRFTGNQSDHGVFPSKHVWDEGFWP 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02594 785 Pfam Protein tyrosine and serine/threonine kinase 382 652 IPR001245 GO:0004672|GO:0006468
Tsu01g02594 785 PANTHER OS01G0750732 PROTEIN 35 781 - -
Tsu01g02594 785 ProSitePatterns Protein kinases ATP-binding region signature. 386 408 IPR017441 GO:0005524
Tsu01g02594 785 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 35 781 - -
Tsu01g02594 785 MobiDBLite consensus disorder prediction 73 106 - -
Tsu01g02594 785 Gene3D Transferase(Phosphotransferase) domain 1 457 677 - -
Tsu01g02594 785 SUPERFAMILY Protein kinase-like (PK-like) 364 651 IPR011009 -
Tsu01g02594 785 MobiDBLite consensus disorder prediction 76 92 - -
Tsu01g02594 785 Gene3D Phosphorylase Kinase; domain 1 350 456 - -
Tsu01g02594 785 ProSitePatterns Serine/Threonine protein kinases active-site signature. 503 515 IPR008271 GO:0004672|GO:0006468
Tsu01g02594 785 ProSiteProfiles Protein kinase domain profile. 380 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02594 Tsu-Chr1 28988450 28995581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02594 127 772 Receptor kinase-like Gene Family AT5G56890 50.299 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Tsu01g02594 PK_Tyr_Ser-Thr 3.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02594 - - gmx:100792309 992.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02594 01 28988450 28995581 Tsu01g02594 01 28988450 28995581 ECH
Tsu07g03764 07 43863296 43869291 Tsu01g02594 01 28988450 28995581 PCT