Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02590 ATGAGATTGAGTTGCAATGGATGTCGTGTACTTCGCAAAGGTTGCAGTGAAGATTGCATCATCAAGCCTTGTCTTGAGTGGATCAAGTCCCCTAAATCTCAAGGCAATGCCACCCTCTTCCTTGCCAAATTCTATGGTCGAACCGGCTTGCTCAACCTCCTTGCTAACACTACCAATCAAAATGCCCCAGCTGTATTCAAATCACTATTGTACGAGGCTTCAGGTAGATTGGTGAATCCAACACATGGGGCTCTAGGTTTATTTTGGATAGGACAATGGAGTCGATGTGAAGCTGCCGTTGAAGCCGTGTTGGCTGGATCAAATATTAATGATGTTACGGTCGTTGATGGACAAACAACACCATGTACACTTATCGCTGAAAATCATGTTCTTCCAACAACAAATGATATACGCCACGTAGCAAGAGGCACTAATGTGGGCATCAAAGATAAAACTCAATTTAAGAGAGTTGGGTCTGCTATCAAGCCTAAGCCACAAGTTGGTTTGGTCAACACAACTACACTTTTGAAATCAGTTTTGGAGAATGGCAGCGTAGAAACTGCAGAGCCTTCGTCCGTGATTGAGACAGAGTTGAATGGAGCTGTTGAAACTCAATTGAACTTGGAACTCACTCTTGGCTTCAATTTCCCATCAAACaatgacaaaaaaacaaatgataattaa 684 0.4181 MRLSCNGCRVLRKGCSEDCIIKPCLEWIKSPKSQGNATLFLAKFYGRTGLLNLLANTTNQNAPAVFKSLLYEASGRLVNPTHGALGLFWIGQWSRCEAAVEAVLAGSNINDVTVVDGQTTPCTLIAENHVLPTTNDIRHVARGTNVGIKDKTQFKRVGSAIKPKPQVGLVNTTTLLKSVLENGSVETAEPSSVIETELNGAVETQLNLELTLGFNFPSNNDKKTNDN 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02590 227 Pfam Lateral organ boundaries (LOB) domain 4 104 IPR004883 -
Tsu01g02590 227 PANTHER LOB DOMAIN PROTEIN 1 225 - -
Tsu01g02590 227 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 225 - -
Tsu01g02590 227 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02590 Tsu-Chr1 28961163 28962329 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02590 1 168 AS2 family AT1G68510 51.176 3.40e-55 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tsu01g02590 LOB 5.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02590 - - mtr:MTR_1g110840 310.842