Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02556 ATGGCTGACTCCACTCAAACTCCAACTAATTCTTCTAATGGCACCCATTCACGAACGATTACATTAAATGATTGGTGGCTTGTTAAATCCCAAAATCACTTCCAAGGAAACCGCTTAGCTGTCTCCGACATCTCTTCAAGAAAGGAAGAAGCGGTTCAGATTTTTGTTTCTGCTCCTATCATTAAAAGATATGATGTGTTTTCCCTTGAGACTGCGGATGGTATATATGTTATCACTAGGGGTTTTATCAACGAGCAGCGCACACTGGAAAATGGTTTTACTCCTCAGATTTTAAAGAGTTTTTTATATGGTTTTCCTCCAAACTGGGAAATCTATGCTCTAGAATGCATCAAAGAAGAATCTGAAGCTGGTATTGATTTGGCCAATGCTGTTCCAGAGAATGTATTTACAATTTGTCAAGAAATCTTGTCTGATGGTGGGGAACATTCCATTCTTACTCCGTTGGTGTTTCCTGAAGAAGTCCCAGGAAAATGCAAGAAACCATTCACTGCAGACAAATGCAAAGTCTCACAGGAGATTAATGGGGTTGATGTTGCTTATGGTAGTGACGAAAATAGACGTTGTACCAGGTTGAATAATATTAAAGTTTATCAGCAGAAGCAACAGCCTGCGTCTGAAGGTCCTCTCAAGCATCTAGATATAGAGCAGCGCTCTACCTCAATGGAAGTGGAAAATTGTGATTCGGATACTGCTGTTTCTAATAATGTATCATCAATTCTTCCAGAAATATCACCTCATGCTATGGAAAATTCTTTTCCTACTTCTTTTGTAACACCGGAGAAGGCCACGGGAGATTGCAAGAAGTCATTACTTGCAGATGAACTTGATAAGTCGATTAAAATGAGTAAGGTCAATGTTATTCATGGTAGTGTGGGGAATAGACGTAGTGTCCGGTTGCATAATGTTAAACTCGGCCAGAAGAAGCAACCTGCTACTTCCAAAGTATCCAAATGA 975 0.3979 MADSTQTPTNSSNGTHSRTITLNDWWLVKSQNHFQGNRLAVSDISSRKEEAVQIFVSAPIIKRYDVFSLETADGIYVITRGFINEQRTLENGFTPQILKSFLYGFPPNWEIYALECIKEESEAGIDLANAVPENVFTICQEILSDGGEHSILTPLVFPEEVPGKCKKPFTADKCKVSQEINGVDVAYGSDENRRCTRLNNIKVYQQKQQPASEGPLKHLDIEQRSTSMEVENCDSDTAVSNNVSSILPEISPHAMENSFPTSFVTPEKATGDCKKSLLADELDKSIKMSKVNVIHGSVGNRRSVRLHNVKLGQKKQPATSKVSK 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02556 324 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 6 155 - -
Tsu01g02556 324 Pfam SANTA (SANT Associated) 20 111 IPR015216 -
Tsu01g02556 324 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 6 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02556 Tsu-Chr1 28312478 28314605 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tsu01g02556 SANTA 7.4e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02556 - - cam:101500947 368.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02556 01 28312478 28314605 Tsu01g02556 01 28312478 28314605 ECH