Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02540 ATGCTAGAGGGCCAACTTCCtccctcctcctcctccaccaccacccCCATCACCACAGAAATCACTCAACAAAAAACACAACTTCCTCCCTCTTCCACCACCATCACCACAACACAAATTGACACAGCAACACGTTCACAGACTCAATTAGAAATTGTTCTAGAGACAACTACTCGACGAGAACAGTCATTTTCTACACTTGAAACTCAAACTGTCACGGGGAACCAGCAACCCGATTCTCAAACTTGTTGGCAGAGGACGTACCCATACTTATATATCTTAATAATACAAGCCATCTTTGCTGCTATGAATATTCTGATGAAGTTTGCGATAAACAAAGGCATAAGCAATTATGTTTTCGTTGTTTATCGCAATGGAATTGCTTCTTCGTTCATTGGCGTAGTTGCATTGTATGTTGATAGGAACAGAAGGCCACCAATGACGATGCGTATAGCCGGGAAGATATTTTTGTTAAGTTTTCTAGGGATCCTTCTCGACCAAAATCTATATTTTGCAGGCATGAAACTCACCACGCCAACCTTTACATGA 549 0.3898 MLEGQLPPSSSSTTTPITTEITQQKTQLPPSSTTITTTQIDTATRSQTQLEIVLETTTRREQSFSTLETQTVTGNQQPDSQTCWQRTYPYLYILIIQAIFAAMNILMKFAINKGISNYVFVVYRNGIASSFIGVVALYVDRNRRPPMTMRIAGKIFLLSFLGILLDQNLYFAGMKLTTPTFT 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02540 182 MobiDBLite consensus disorder prediction 1 36 - -
Tsu01g02540 182 PANTHER WAT1-RELATED PROTEIN 84 181 - -
Tsu01g02540 182 PANTHER WAT1-RELATED PROTEIN 84 181 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02540 Tsu-Chr1 28054849 28055800 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02540 76 182 Nodulin-like Gene Family AT2G37460 42.056 3.13e-24 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02540 - - cam:101496299 98.9821