Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02531 ATGGACAAAATCAAATCTCACCGCTCCAACTCCAAACAagTGAAAGATCAGATTCATAAACAGCGACAACATCCGAATTTATCTCCTGATTCTAGTTCTTCCAGTGGTGGGGTTGCAGACAAAGATTCGTTCTCATTTAAATTTGGGTGGAAATCTTCTAAGCAATCAGTTGGAACTCCGATTAAGAAGTTATTAGCCGAAGAGATGTCACCGGTGACTGAATCCAAGAGAAGATCCCCGGGTGTTATAGCTAGATTGATGGGTCTTGATGGCCTTCCGTCACAGCAGTCTACTAATAAGCAGCACAAGGATCTACAGAAGTCAACACCTTTGGAGAAAACTCGAAACAGAGGAATGGTAAATGAAGGCCGGTCGTCTAGGAGAAGCTCAAGGGACCAGGAAGAATTTAAGGATGTATTTGAGGTTTCAGAGATCCCGAAGGTAGAGAGCGGTAGGTATTCATCTTCAAACTTAAAGGTCAATGAAGATGAAATGTCATTTATTGAACAGAAGTTCATGGATGCCAAACGCCTTGCGACTTATCAGGATTTTCAGTCTTCAAAGGATTTCCATGATACACTTGAGGTTTTGGACTCTAACAAGGATCTTCTGCTAAAGTACTTGAAGCGGCCAGATTCTTTGTTTAAAAAGCATTTGAATGATCTGCAAGATACCCCTTTCCAATCACATTCCAGTCATGTAGAATCAACTAATATGGAGAACTTTGAACATGATTTCAATTGGAGGTCAGATAGGGAGACAACACAGGTGAATTACAATAGGTTTCATCAGAAGCAGCGTGATGGTTATCATGGCCAATTTGACAAAAGGCGTGTGATGCATAATTCACCAAGATCATCAAAGCACCAGTTTAAGGGTAGCCACGAACAAGGTGCAGTCCCAACAAAAATTGTTGTCCTAAAACCGAATCTTGGAAAATTGCAGAATGGTACCAGAATTGAATCATCACCTTGTTCTCCGCGTAGTTTTTTGTCAGAACATGGAAATCATGCTGAATTTCCAGATGTCAGAGTTAGAGATACTGAAAtgtatcaaaaaataaatttgccGGACAGTGCCAGGTCTTTTAGGCACAATTCTTTAGAATCTAGAGAGATTGCAAAGGAAGTAACTAGGCAAATGAAAAACAGTTTGAGCAATGGTTGCACGTTGTCTTCCTCTTCTAGAATTAAAGGGTACAATAGAAATGATAGTTCAAGCAGTGTTTCTGGGAATGAATCTCCAGAGGAAATAACAGCAACTTCGGGTGACCCGTTTGACTTAAATAAACGTCGCAGACGGTCACCGCATTCTTGTGAATCATCTGTGAGTAGAGAGGCAAAGAAGAGATTATCAGAGAGGTGGAAGATGGCACACAAATCTCAAGAGGTGCAAGGCACCAGCAGGAGCAGCACACTGGGTGATATGCTAGCATTCCCTGGTAAGAGAATAAAGGGTACACATTTTGACGGCATGACTACTGGGGAAGGTTTCTATGATAAGTTTGCTCACAATGGTGAACCTTCTGAGTGGGTTGAACCACTGGGTATCAGCAGCAAGGATGGTTGGAGGGATGCAAGCATTGGAAGTTTGTCGAGGTCAAAATCTCTTCCTGCTTCTTCTACTGTGTTTGGAAATCCTAGAACATACTTGTGTGCCGAAGCACTTCGTAATGATCGATATATGGTGCCAAAGGACCTTAAAAGGGAGAGGAGAAGAGCGACAAAGACTCTTGATCATAGACATGGTATGACTTCTAGAAGTACAATATCTGGACACAAGAAGTCTTGGTCTTTGCATTCATTGAAGCAGGAAGTTAGCGAGTTTTCTCCTGACTTAAATGCAGTTCAAAGTAACATAAAGATCAAGCTTGAAGAAGATTCACCCAATTTAGAGGTTCTGGCTCCTGAAGCCTTTGATCAACCCCTTAGAGATACAAGTGCTGTTAATGATGTTATTGCGGACGCGGCAAATGAAAACTCTGAACCTTCTTCGGATAAGGTGCTTCCTGGATCATCGTCCTGTGTCTTGATAAAAGGCGAGAGAAGTGTTGTTGACAAATCCAATCCAATGCAAGAGGACGTAACAGCTGGTTCTACTGGTGGAAATTCAGTCCTCCCTGAAGCACCTGTGGCTGGACTTGAATCTCCATGCTGTAAAGATGCTGATCAGCCCAGTCCAATCTCAGTTTTAGATCCTTCTTTTACAGATGATCTGTCATCTTGTTCTGAATGTTTTGGAAGTGTTAGTGCTGATCTACAAGGGCTTCGAATGCAACTCCAGTTGCTGAAGTTGGAATCTGAAGAACATGTGGAGGGACCTATGCTAATTTCAAGTGATGAAGATGGTGAGGAAGCATCTGTTGGAATGTTAGAAGTCAATTCATTATGGAGAACCGAAGATAGTTGGGAGTCTTCCTACATTATTGATGTCTTGTCTGAATCTGCTATTGTTGAGGCTCAAACTGATAATATTTTGGAAGTTTGGCATTCTCTAGAAAGCCCCGTGAGTCTGTCCGTGTTTGAAGAACTCGAAGAGAAGTACGATGATTGGACTACTTGCTCAAGGTCTGAAAGAAGATTGCTTTTCGACCGCATCAATTCAGGAATTGTCAAGATTCATGAGCAATTTACTAACCTACAACCATGGATGGGAAATGCAGCTCTAAGTTTTGGATCAAAAAGGATTAATGGGCTTAAAGATGGTCTTTTCCAGATGCTAGGGAGCCAAGGAAAGGTAGAAGATGATGTCCTGGGTAAGTTGCTGATTGCGGAGTCTCAATGGTTGAAATTGAGAGATGACATTGATGTAATAGGCAGAGAAGTTGAGAGATTGATATTAGATGATTTAGTTGCAGAAATAGTCGGTATCTAG 2874 0.4144 MDKIKSHRSNSKQVKDQIHKQRQHPNLSPDSSSSSGGVADKDSFSFKFGWKSSKQSVGTPIKKLLAEEMSPVTESKRRSPGVIARLMGLDGLPSQQSTNKQHKDLQKSTPLEKTRNRGMVNEGRSSRRSSRDQEEFKDVFEVSEIPKVESGRYSSSNLKVNEDEMSFIEQKFMDAKRLATYQDFQSSKDFHDTLEVLDSNKDLLLKYLKRPDSLFKKHLNDLQDTPFQSHSSHVESTNMENFEHDFNWRSDRETTQVNYNRFHQKQRDGYHGQFDKRRVMHNSPRSSKHQFKGSHEQGAVPTKIVVLKPNLGKLQNGTRIESSPCSPRSFLSEHGNHAEFPDVRVRDTEMYQKINLPDSARSFRHNSLESREIAKEVTRQMKNSLSNGCTLSSSSRIKGYNRNDSSSSVSGNESPEEITATSGDPFDLNKRRRRSPHSCESSVSREAKKRLSERWKMAHKSQEVQGTSRSSTLGDMLAFPGKRIKGTHFDGMTTGEGFYDKFAHNGEPSEWVEPLGISSKDGWRDASIGSLSRSKSLPASSTVFGNPRTYLCAEALRNDRYMVPKDLKRERRRATKTLDHRHGMTSRSTISGHKKSWSLHSLKQEVSEFSPDLNAVQSNIKIKLEEDSPNLEVLAPEAFDQPLRDTSAVNDVIADAANENSEPSSDKVLPGSSSCVLIKGERSVVDKSNPMQEDVTAGSTGGNSVLPEAPVAGLESPCCKDADQPSPISVLDPSFTDDLSSCSECFGSVSADLQGLRMQLQLLKLESEEHVEGPMLISSDEDGEEASVGMLEVNSLWRTEDSWESSYIIDVLSESAIVEAQTDNILEVWHSLESPVSLSVFEELEEKYDDWTTCSRSERRLLFDRINSGIVKIHEQFTNLQPWMGNAALSFGSKRINGLKDGLFQMLGSQGKVEDDVLGKLLIAESQWLKLRDDIDVIGREVERLILDDLVAEIVGI 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02531 957 MobiDBLite consensus disorder prediction 426 460 - -
Tsu01g02531 957 MobiDBLite consensus disorder prediction 1 23 - -
Tsu01g02531 957 MobiDBLite consensus disorder prediction 105 135 - -
Tsu01g02531 957 MobiDBLite consensus disorder prediction 24 39 - -
Tsu01g02531 957 PANTHER AFADIN 15 955 - -
Tsu01g02531 957 MobiDBLite consensus disorder prediction 379 419 - -
Tsu01g02531 957 Pfam Protein of unknown function (DUF3741) 169 213 IPR022212 -
Tsu01g02531 957 Pfam Domain of unknown function (DUF4378) 805 953 IPR025486 -
Tsu01g02531 957 MobiDBLite consensus disorder prediction 379 474 - -
Tsu01g02531 957 PANTHER AFADIN 15 955 - -
Tsu01g02531 957 Pfam DUF761-associated sequence motif 75 97 IPR032795 -
Tsu01g02531 957 MobiDBLite consensus disorder prediction 1 39 - -
Tsu01g02531 957 MobiDBLite consensus disorder prediction 65 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02531 Tsu-Chr1 27871923 27877574 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02531 57 955 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 36.842 3.72e-135 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02531 - - ccaj:109788117 1191.02