Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02513 ATGGTGAGATCTTGCTGGAAGCCAGTTGTAGAGGATGATGATGGAGATGGGAGTGGAAGTGGTAGTGGTAGCAGAGTTGATGGGTTGTTATGGTATAAAGATATAGGGAACCATGTTTATGGTGAATTTTCAATGGCTGTGATTCAAGCTAATAGTTCTTTGGAAGACAGAACTGAACTTGAGTCTGGACCTTTGAGTTTTAACCATTTGGGTCCTCAAGGGACTTTTATTGGGGTTTATGATGGTCATGGTGGAGCTGAGGCTTCTCAATTTGTCAGTGATAATCTCTTTTGCAATCTCAAAAGGGTTGCAACTGAGCAACAAGGCTTATCAGAAAACGTGATCAAAAGGGCATTTTGGGAAACAGAGGAGAGTTTTCTATCACTTGTGAAGAAACAGTGGCTAAGACAGCCATATATTGCATCAGCAGGAACATGTTGTTTGGTCGGGATAATTTGCAACGAAATGATATATATTGCAAACTCCGGTGACTCAAGGGTGGTGTTAGGAAGACTAGAGAGGGCAACAAGGGAAACATCAGCTATACAATTATCTACAGAACATAATGTTAACCTTGAAAGAGTGAGAGATGAACTTAGATCAAAGCACCCCTATGATTCACAAATTGTTGTTATGAGACACAATGTTTGGCGTGTGAAAGGCCTCATtcagGTTTCGCGATCCATCGGTGATGCATATTTGAAGAAAGCAGAATTCAATAGGGAGCCTCTATCACCAAAGTTTAGACTAGCTGAAACATTCTTCAAACCAATTCTTAGTTGTGAGCCATCAATTTCATCACACAAACTTCATCCTGATGACCAATTTCTTATATTTGCTTCTGATGGATTATGGGAGCATCTTAGCAACCAAGAGGCTGTCAGCATGGTCAGCAATAATGCACCTAATGGAATTGCAAGAAGACTTGTGAAAGCAGCTCTTAGAGAAGCAGCTAGAAAGAGTGAGATGAGACTGACAGACCTACAAAAGATTGAACAAGGGACAAGGAGACACTTTCATGATGATATAACAGTGACTGTTGTGTTTCTAAATCACAAATTCATTGATAATAGCTCTATTTGGGGTCCTCCTCTTTCAATCAAGGGAGGTGGATCTTTCAATCACTAG 1128 0.4025 MVRSCWKPVVEDDDGDGSGSGSGSRVDGLLWYKDIGNHVYGEFSMAVIQANSSLEDRTELESGPLSFNHLGPQGTFIGVYDGHGGAEASQFVSDNLFCNLKRVATEQQGLSENVIKRAFWETEESFLSLVKKQWLRQPYIASAGTCCLVGIICNEMIYIANSGDSRVVLGRLERATRETSAIQLSTEHNVNLERVRDELRSKHPYDSQIVVMRHNVWRVKGLIQVSRSIGDAYLKKAEFNREPLSPKFRLAETFFKPILSCEPSISSHKLHPDDQFLIFASDGLWEHLSNQEAVSMVSNNAPNGIARRLVKAALREAARKSEMRLTDLQKIEQGTRRHFHDDITVTVVFLNHKFIDNSSIWGPPLSIKGGGSFNH 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02513 375 SMART PP2C_4 36 348 IPR001932 -
Tsu01g02513 375 Gene3D - 32 359 IPR036457 -
Tsu01g02513 375 PANTHER ALPHABET, ISOFORM E-RELATED 3 373 - -
Tsu01g02513 375 CDD PP2Cc 40 350 IPR001932 -
Tsu01g02513 375 ProSitePatterns PPM-type phosphatase domain signature. 76 84 IPR000222 GO:0043169
Tsu01g02513 375 SUPERFAMILY PP2C-like 51 351 IPR036457 -
Tsu01g02513 375 Pfam Protein phosphatase 2C 73 319 IPR001932 -
Tsu01g02513 375 ProSiteProfiles PPM-type phosphatase domain profile. 39 350 IPR001932 -
Tsu01g02513 375 PANTHER SERINE/THREONINE PHOSPHATASE FAMILY, 2C DOMAIN PROTEIN 3 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02513 Tsu-Chr1 27478476 27481274 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02513 1 373 PP2C-type Phosphatase Gene Family AT3G12620 64.439 1.33e-178 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02513 K01102 - gmx:100819870 617.461