Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02506 ATGGAAGACCTACAAAGCCCTAATCTCGAATCCGCTTCCTACCACAACTCCGAAAGTTCTAAATCGCCCGTACATTCGgAAGACGAATGTGTGCAAAATTGTGACGATGATCTAAAGCCTAAGGTTGGACAAATCTTTGATACATTGGAAGAGGGTCAAAAGTTTTACAAAAACTATGCACATGTTGTTGGATTTAGTGTGCGCGCCTCATCGGAAACTAAAGATAAAAAGGGGGTGAAACGTTGGAAGCATTATGTTTGCTCGAAAGAAGGTTACTTACCAAATAAGACAAGACGAGGAGCAAAGTGA 309 0.411 MEDLQSPNLESASYHNSESSKSPVHSEDECVQNCDDDLKPKVGQIFDTLEEGQKFYKNYAHVVGFSVRASSETKDKKGVKRWKHYVCSKEGYLPNKTRRGAK 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02506 102 MobiDBLite consensus disorder prediction 1 32 - -
Tsu01g02506 102 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 14 98 - -
Tsu01g02506 102 Pfam FAR1 DNA-binding domain 54 99 IPR004330 -
Tsu01g02506 102 MobiDBLite consensus disorder prediction 1 20 - -
Tsu01g02506 102 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 14 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02506 Tsu-Chr1 27415556 27415956 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu01g02506 FAR1 5.8e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02506 - - mtr:MTR_4g080290 120.553