Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02496 ATGTTAGGAGCCAATGATGGATTAATCACTGTTGCTTCACTGATGATTGGTGTTGGAGCTATAAAAGAAGAAATCAGTGTACTGCTCCTTGCTGGTTTCGCCGGTTTAGTAGTCGGTGCTTGTAGCATGGCAATCGGTGAGTTTGTTTCTGTTTATACTCAATATGATATTGATATAGCAcaaattaaaagagaaagagaattagcaaataataataatgatgaagaAAGTAGTGAAAGAGAGAAATTGCCAAATCCATTTCAAGCAACATTAGCATCAGCACTTGCATTTACCGTTGGTGCACTAATGCCATTGCTAGCAGCTGCATTCATAAAGAATTATAAGATTAGAATGGgtgttgttgctgctgttgtGAGTTGGTGGGAGCATTGA 393 0.3308 MLGANDGLITVASLMIGVGAIKEEISVLLLAGFAGLVVGACSMAIGEFVSVYTQYDIDIAQIKRERELANNNNDEESSEREKLPNPFQATLASALAFTVGALMPLLAAAFIKNYKIRMGVVAAVVSWWEH 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02496 130 Coils Coil 59 79 - -
Tsu01g02496 130 PANTHER VACUOLAR IRON TRANSPORTER-LIKE PROTEIN 1 126 - -
Tsu01g02496 130 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 1 126 IPR008217 GO:0005384|GO:0030026
Tsu01g02496 130 Pfam VIT family 78 124 IPR008217 GO:0005384|GO:0030026
Tsu01g02496 130 Pfam VIT family 1 76 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02496 Tsu-Chr1 27222072 27222464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02496 1 126 Nodulin-like Gene Family AT3G43660 60.317 2.83e-53 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02496 K22736 - gmx:100790996 182.956