Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu01g02493 | atgaactCCAACTCTCACTCAATGgcaacaccaacaccaacaccGACTAGTGGCGGCGGAGGCGGAGATGCTTCTAGCAAAAAGATTAGAAAGCCATACACCATTACTAAGTCCAGAGAAAGCTGGTCTGACGAAGAACATGACAAGTTTCTTGAAGCTCTTCAATTATTTGATAGGGATTggaagaaaattgaagattttgTAGGTTCTAAAACTGTTATTCAGATTCGAAGCCATGCCCAAAAGTACTTCTTAAAGGTTCAAAAAAATGGAACACTTGCACATGTTCCTCCTCCTCGTCCTAAACGCAAAGCTATTCATCCTTATCCACAAAAAGCAACCAAAAATGTTTTGCTGCCACTGCCAGCATCCATTGCTTATGGATCATCCACAAATAGCCTTTTACCTGCAGGGTATGTCACATGGGATGAAAATTCTATGCTCATGGATACTTTTCAGGATGAACTCAACAATCTTCATGGAAATGAAGCTGATATTGGATCGGAGGGGATTAGCAACAGTGGTCTAACTGGTGTTGGAGACTCTACTACAAGGCTCACCGCTTCTCAAATACCAAATCAAGGGAAACAAAATCCTGTAACTCATGGTTTGCCGGACTTTGCTGAAGTTTACGGTTTCATTGGAAGTGTTTTTGATCCGGATACAAATGGCCATGTACAGAAGCTTAAGGAAATGGATCCTATAAACTTTGAAACTGTTTTGTTGTTAATGAGAAACCTCACTGTCAATTTGTCTAGCCCTAATTTTGATCCCATTAAGAAGGCAATGTCAACATATGATGTGAATAACGATGCAGTAGGAGGAGTTACTGATGTGAAGAAGCAGACAAATGATGTATCATGTCAAAACACTTAA | 876 | 0.3801 | MNSNSHSMATPTPTPTSGGGGGDASSKKIRKPYTITKSRESWSDEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTLAHVPPPRPKRKAIHPYPQKATKNVLLPLPASIAYGSSTNSLLPAGYVTWDENSMLMDTFQDELNNLHGNEADIGSEGISNSGLTGVGDSTTRLTASQIPNQGKQNPVTHGLPDFAEVYGFIGSVFDPDTNGHVQKLKEMDPINFETVLLLMRNLTVNLSSPNFDPIKKAMSTYDVNNDAVGGVTDVKKQTNDVSCQNT | 291 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu01g02493 | 291 | CDD | SANT | 41 | 84 | IPR001005 | - | |
Tsu01g02493 | 291 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 34 | 88 | IPR017930 | - | |
Tsu01g02493 | 291 | SMART | sant | 38 | 86 | IPR001005 | - | |
Tsu01g02493 | 291 | PANTHER | SWI/SNF COMPLEX-RELATED | 16 | 284 | - | - | |
Tsu01g02493 | 291 | ProSiteProfiles | Myb-like domain profile. | 34 | 84 | IPR001005 | - | |
Tsu01g02493 | 291 | ProSiteProfiles | SANT domain profile. | 37 | 90 | IPR017884 | - | |
Tsu01g02493 | 291 | Pfam | Myb-like DNA-binding domain | 39 | 84 | IPR001005 | - | |
Tsu01g02493 | 291 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
Tsu01g02493 | 291 | Gene3D | - | 42 | 89 | - | - | |
Tsu01g02493 | 291 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 37 | 86 | IPR006447 | GO:0003677 | |
Tsu01g02493 | 291 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Tsu01g02493 | 291 | PANTHER | PROTEIN REVEILLE 8 | 16 | 284 | - | - | |
Tsu01g02493 | 291 | SUPERFAMILY | Homeodomain-like | 33 | 89 | IPR009057 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu01g02493 | Tsu-Chr1 | 27197545 | 27204053 | Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Tsu01g02493 | Myb_DNA-binding | 4.4e-11 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu01g02493 | - | - | gmx:100797466 | 433.335 |