Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02490 ATGCTCACAAGTCTTCTCTCCGAAGAATTCTCCatagttgaaattgaaatggaATATTTCTTTCTCTTCACTCTCTCATTCATCTTCCTACTTTTCTTCCCTTTTTCCTCTGCTCAGATGCCAGGTTTTGTAAGTTTGGACTGTGGAGGTGATAAAAATTTCACTGATGAAATTGGTCTTAAATGGACTCCTGATGATAAGATTACTTATGGAGAAATAAGTACTATTTCGGTAGCCAATGAGACACGTAAGCAGTATATGACGCTTCGACACTTTCCTGCCGATTCAAGAAAATACTGCTACACACTTGATGTTGTTAGTAGGACAAGGTATCTACTGAGGGCAACGTTCTTGTATGGAAATTTTGATAACAACAACGTTTATCCGAAATTCGACATTTCTATCGGGGCTACTGATTGGTCTACTATTGTTATATCTGACGCAAACACTACAGAAGtaagagaaattatatttttggctTCAAGTCCTACTGTTAGTGTATGTCTATCCAATGCAACAACTGGGCAGCCATTCATATCTACACTTGAACTTAGGCAATTCAACGGTTCCGTTTATTATACATTCTTTGAGGAAGACTTTTACCTCAGCGTCTCCGCGAGGATAAATTTTGGTGCAGAGAGTGATGCCCCAGTTAGGTATCCTGATGACCCGTTTGATAGAATTTGGGAGTCAGATTCTGTCAAGAAAGCAAATTACCTCGTTGATGTTGCTTATGGAACCAAGAAAATTTCCACCAATGTATCAATTGATATTAACAGAGAAGAAATGCCACCAGTGAAAGTAATGCAGACAGCTGTAGTAGGTACAAATGGATCTCTAACATACCGGTTGAACTTGGATGGTTTTCCTGCTATGGGACGGGCATTCAGCTATCTTGCAGAGATAGAAGATTTTCCGCATAATGAATCTCGAAAATTCAGGCTAGTACTTCCAGGCCAGTCTGAAATTAGTAAGGCCGTGGTAAATATCGAAGAGAATGCTCTAGGAAAATATCGTGTTTATGAACCGGGATTTAACAATTTATCCCTACCCTTTGTGATGTCCTTTAAATTAGCCAAAACATCAGATTCTTCCAAGGGTCCTCTTCTCAATGCCATGGAGATTAATAAGTATCTAGAAAAAAACGATGGCTCTCCTGATGGAGAAGCTATATCTAGTGTACTTTCTCACTACTCATCAGCAGATTGGGCACAAGAAGGGGGGGATCCATGTTTACCTGTTCCATGGTCGTGGGTCCGATGTAGCTCAGATCAACAGCCAAGAATAGTTTCAATTTTGTTGTCTGGGAAAAACATGACGGGCGATATTCCTTTGGACATCACCAAATTGACTGGTCTCGTTGAACTATGGCTTGATGGAAATATGCTGACAGGCCCAATACCAGATTTCACCGGATGCATGGACTTAAAGATCATTCATCTTGAGAACAATCAGTTGGCGGGTGTGCTCCCAGCCTCTTTGGGGAGCCTTCCAAATTTGAAGGAACTGTATGTCCAGAACAATAGGTTATCTGGAACCATACCGTCAGAACTTTTGAGCAAATATTTACTGTTCAACTACTCTGGAAACAACAATCTTAATAAAGGAAGCAGAAAAAACAATCAATTGTATGTCATTATTGGTTCAGCAGTTGGGgccgccattttacttttggcTACTATTATATCATGTTTGTGTATGCATaaaggaaagagaaaatattatgATCAAGATCACCTTGTTTCACTCTCTACTCAAAACCTGGAATCTAAGAGTGATGGCCATGCAGAAGTTGCTCACTGCTTCAGTTTTTCTGAAATTGAAAGCTCAACAAAtaattttgagaagaaaattggatctgGAGGTTTTGGAGTTGTTTACTATGGGAAACAGAAAGATGGAAGAGAGATAGCAGTTAAAGTTTTAACTAGTAACTCCTATCAAGGCAAAAAAGAGTTCTCAAATGAGGTGACTCTTCTGTCGAGGATACATCACAGAAACTTGGTACAGCTTCTAGGTTATTGCCGAGAAGAAGGGAATAGTATTCTTATTTATGAGTTCATGCATAATGGAACTCTCAAGGAACATCTTTATGGCCCATTAACACACGGACGGAGTATCAATTGGATTAAGCGACTTGAGATCGCCGAAGATTCTGCCAAAGGGATTGAGTATCTTCACACTGGATGTGTCCCAGCAGTTATCCATAGAGACCTAAAAAGCAGCAACATTCTTCTTGACAGGCACATGAGAGCTAAGGTTTCAGATTTTGGCCTTTCGAAACTCGCTGTTGATGGAGCCTCTCATGTCTCTAGTATAGTTCGGGGTACAGTAGGATATCTGGATCCTGAGTACTATATTTCTCAGCAGCTAACCGACAAGAGCGATATTTATAGTTTTGGCGTAATTCTTCTCGAACTCATATCTGGTCAAGAAGCAATATCTAATGACAGCTTTGGTGCTAATTGCAGAAACATAGTCCAATGGGCAAAAATGCACATTGAGAGTGGTGATATACAAGGTATAATAGATCCAGCATTACACGGAGACTATGACTTACAATCAATGTGGAAAATAGCAGAGAAAGCGTTGATGTGCGTTCAACCACATGGGCACATGAGGCCATCAATATCAGAAGTTGTGAAAGAAATTCAAGACGCAATTGCTATTGAAAGAGAGGCGGAAAGCATCTCGGAGGATGAAAATATGACAAGAAATTCAGTTCACTCTTCCATCAACATGGGTTCTATGGATCTCGCTGCAGCAGAGAATTACCTCGCTATTGATGATTCCATTGCACGCCCCAAAGCACGATAG 2817 0.3901 MLTSLLSEEFSIVEIEMEYFFLFTLSFIFLLFFPFSSAQMPGFVSLDCGGDKNFTDEIGLKWTPDDKITYGEISTISVANETRKQYMTLRHFPADSRKYCYTLDVVSRTRYLLRATFLYGNFDNNNVYPKFDISIGATDWSTIVISDANTTEVREIIFLASSPTVSVCLSNATTGQPFISTLELRQFNGSVYYTFFEEDFYLSVSARINFGAESDAPVRYPDDPFDRIWESDSVKKANYLVDVAYGTKKISTNVSIDINREEMPPVKVMQTAVVGTNGSLTYRLNLDGFPAMGRAFSYLAEIEDFPHNESRKFRLVLPGQSEISKAVVNIEENALGKYRVYEPGFNNLSLPFVMSFKLAKTSDSSKGPLLNAMEINKYLEKNDGSPDGEAISSVLSHYSSADWAQEGGDPCLPVPWSWVRCSSDQQPRIVSILLSGKNMTGDIPLDITKLTGLVELWLDGNMLTGPIPDFTGCMDLKIIHLENNQLAGVLPASLGSLPNLKELYVQNNRLSGTIPSELLSKYLLFNYSGNNNLNKGSRKNNQLYVIIGSAVGAAILLLATIISCLCMHKGKRKYYDQDHLVSLSTQNLESKSDGHAEVAHCFSFSEIESSTNNFEKKIGSGGFGVVYYGKQKDGREIAVKVLTSNSYQGKKEFSNEVTLLSRIHHRNLVQLLGYCREEGNSILIYEFMHNGTLKEHLYGPLTHGRSINWIKRLEIAEDSAKGIEYLHTGCVPAVIHRDLKSSNILLDRHMRAKVSDFGLSKLAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDIYSFGVILLELISGQEAISNDSFGANCRNIVQWAKMHIESGDIQGIIDPALHGDYDLQSMWKIAEKALMCVQPHGHMRPSISEVVKEIQDAIAIEREAESISEDENMTRNSVHSSINMGSMDLAAAENYLAIDDSIARPKAR 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02490 938 PANTHER TYROSINE KINASE DOMAIN PROTEIN 27 938 - -
Tsu01g02490 938 Pfam Malectin-like domain 46 376 IPR024788 -
Tsu01g02490 938 ProSitePatterns Serine/Threonine protein kinases active-site signature. 734 746 IPR008271 GO:0004672|GO:0006468
Tsu01g02490 938 ProSitePatterns Protein kinases ATP-binding region signature. 618 640 IPR017441 GO:0005524
Tsu01g02490 938 PANTHER OS07G0107800 PROTEIN-RELATED 27 938 - -
Tsu01g02490 938 SMART serkin_6 612 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g02490 938 SUPERFAMILY L domain-like 414 533 - -
Tsu01g02490 938 Gene3D Phosphorylase Kinase; domain 1 584 687 - -
Tsu01g02490 938 Gene3D Ribonuclease Inhibitor 389 545 IPR032675 -
Tsu01g02490 938 Gene3D Transferase(Phosphotransferase) domain 1 688 912 - -
Tsu01g02490 938 SUPERFAMILY Protein kinase-like (PK-like) 599 886 IPR011009 -
Tsu01g02490 938 Pfam Protein kinase domain 614 832 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g02490 938 CDD STKc_IRAK 618 885 - -
Tsu01g02490 938 ProSiteProfiles Protein kinase domain profile. 612 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02490 Tsu-Chr1 27136590 27141922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02490 33 722 Receptor kinase-like Gene Family AT2G37050 66.905 0.0 975
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Tsu01g02490 Malectin_like 2.5e-76 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02490 - - gmx:100798007 1561.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03841 07 44609825 44614776 Tsu01g02490 01 27136590 27141922 PCT