Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02474 ATGGGGAACAAGAAGCCAAATTGGTTCTCCAATGTGAAGAAAGTTCTTAGCCCTGACtcaaaggaaaacaaaaaccAGAATTCAAGTGGATCCAAGAAGAAATGGTTTgggaagaaaaaattacacactTCAGATTCATCGTACCAAGAAACTGATCAAGCACCTCCTTTTCATCCACCTGAGGAGGAGATTATTTTAACTCATGTTGTGAATGAAAATAATCATGATCATGTTGAGGTTGTAACAGATGTTGATGTTGAGGTACCAGTTCCCGATGTTCAGATACAAATTGCCGAGGTTCAAGCCACTCCAATTGTTCAGTTTACCAGTAAACCTCCAACGAATGATGTTGCAgcaatcaaaattcaaactgCTTTTCGGAGATACATGGCAAGAAGAGCATTGAGGGCTTTAAGGGGGCTGGACAGGTTGAGATTGCTAATGGAAGGGCCAGTGGTGAAACGTCAAGCCATTAGTACCCTTCGCTCTATGCAGACTTTAGGTCATGTGCAATCTCAGATTCGTTCGAGGCGGCTCAGGATGCTAGAGGAGACTCAAGCTCTGCAAAAACAGCTCTTACAGAAGCACACAAAAGAGCTAGAGATACAGATTGGGGAGGAATGGGATGAAAGCATACAATCAAGAGAACAAATCGAAGCCAAGTTACTAAGCAAGTACGAGGCTGCTATGAGAAGAGAAAGAGCAATGGCTTATTCATTCACTCATCAGAAAAATGGGAGGAATTCATCGAAATCTATAAACCCAATGTTCACGGATCCAACCAATCCTGCTTGGGGATGGAGCTGGTTGGAGCGTTGGATGGCAGCCAACCAAAGCCTGATGGATAAAGACAACAACAATTCATCTGCAAAAAGTTCAAGCCGCGGGATCACCAGTGCTGAAATCAGCAAATCATTTGCTCGTTTCCAGCTGAATTCCGATAAACATTCTCCAACAGCCAGCCAAAATCCGGGTTCGCCTAACTTCCAGTCCATTTCAAAGCCTCCCAAACCAACAGTCGGTAAGAAACTGAATAAGGCAAGCCCAAAGGAAAGCTTTATTATGGACGATGACACCAAAAGCATGACGAGTGTGCAGTCAGAGAGAGTCCGGAGGAGGCACTCCATTGCTGGATCAACAGTGAGGGATGATGAAAGCCTTGCAAGCTCTCCATCAGTTCCAAGTTACATGGTGCCAACTAAATCTGCAAAAGCTAAGTCTAGGTTGCAAAGTCCATTAGCTGCAGAAAATGGAACACCAGAGAAAGGGTCCTTTGGAAATGCGAAGAAACGACTCAATTTCCCGGCTTCGCCTGCTAGATCAAGGCGCCATTCCGGTCCACCAAAGGTAGAAAGCAGCTTAAATGCAGAAATCACCGTTTGA 1383 0.4302 MGNKKPNWFSNVKKVLSPDSKENKNQNSSGSKKKWFGKKKLHTSDSSYQETDQAPPFHPPEEEIILTHVVNENNHDHVEVVTDVDVEVPVPDVQIQIAEVQATPIVQFTSKPPTNDVAAIKIQTAFRRYMARRALRALRGLDRLRLLMEGPVVKRQAISTLRSMQTLGHVQSQIRSRRLRMLEETQALQKQLLQKHTKELEIQIGEEWDESIQSREQIEAKLLSKYEAAMRRERAMAYSFTHQKNGRNSSKSINPMFTDPTNPAWGWSWLERWMAANQSLMDKDNNNSSAKSSSRGITSAEISKSFARFQLNSDKHSPTASQNPGSPNFQSISKPPKPTVGKKLNKASPKESFIMDDDTKSMTSVQSERVRRRHSIAGSTVRDDESLASSPSVPSYMVPTKSAKAKSRLQSPLAAENGTPEKGSFGNAKKRLNFPASPARSRRHSGPPKVESSLNAEITV 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02474 460 MobiDBLite consensus disorder prediction 313 335 - -
Tsu01g02474 460 MobiDBLite consensus disorder prediction 382 397 - -
Tsu01g02474 460 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
Tsu01g02474 460 MobiDBLite consensus disorder prediction 13 32 - -
Tsu01g02474 460 Pfam Protein of unknown function (DUF4005) 383 446 IPR025064 -
Tsu01g02474 460 PANTHER IQ-DOMAIN 5-RELATED 5 458 - -
Tsu01g02474 460 Pfam IQ calmodulin-binding motif 118 136 IPR000048 GO:0005515
Tsu01g02474 460 MobiDBLite consensus disorder prediction 349 380 - -
Tsu01g02474 460 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 5 458 - -
Tsu01g02474 460 MobiDBLite consensus disorder prediction 313 460 - -
Tsu01g02474 460 MobiDBLite consensus disorder prediction 1 59 - -
Tsu01g02474 460 SMART iq_5 114 136 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02474 Tsu-Chr1 26990710 26994453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02474 1 452 IQD Protein Family AT5G03040 51.277 6.06e-129 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02474 - - gmx:100799058 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02474 01 26990710 26994453 Tsu01g02474 01 26990710 26994453 ECH
Tsu07g03849 07 44663737 44667439 Tsu01g02474 01 26990710 26994453 PCT