Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02468 ATGGCTAACAAGTCTTGTTCTAATTACTCTTTCCTTTTTCTATTGATTCTCCTACATTTTAATTTGGGGAAAAGCCAGTTACAGGTGAATTACTACTCCACTAGCTGCCCAAAAGCAGAAGAGATCATCAAGCAACAAGTCACTGAATTATATCACTGGCATGGAGACACAGCCATTTCATGGGTTAGAAATCTCTTCCATGATTGTGTAGTCAAGTCATGTGATGCATCCCTTCTTTTATCGACGGTGCGCGGTGTAGTAGTATCGGAGCAGACATCCGGGAGAAGTTTTGGGATGAGAAATTTCAAGTATGTGAACAACATCAAAACTGCTGTTGAGAAAGAATGTCCTTTGACAGTGTCATGTGCTGACATTGTTGCACTTTCTGCTAGAGACGGCATTATTATGTTGGGAGGACCAAACATTGAAATGAAGACAGGAAGAAAGGATAGTAAAGAAAGCTATTCAACGGTGGTGGAAGAATTCATTCCAAACCATAATGACTCCATATCCTTAGTGCTCTCTCGTTTTCAAGCAGTTGGCGTTGACGTTGAAGCAACCGTTGCTCTTTTAGGAGCACACTCAGTTGGAAGAGTACACTGCATGAATTTGGTCCACAGACTATACCCAACAGTGGACCCAACACTAAACCCAATACATGCTGCATACCTAAAACGTAGGTGCCCAACACCATATCCAGATCCAAAAGCTGTTCAATATGTGAGGAATGATCTAAAAACACCTATGATAATTGACAACAACTACTACAAGAACATTTTACAACATAAGGGTCTTCTCACTATTGATGAAGAACTAGCCACTGATCCAATAACAGCACCTTATGTACAAAAAATGGCAGAAGATAATGATTACTTCAATGAACAATTCTCAAGGGCTGTTCTTTTGTTGTCTGAGAATAATCCTCTTATTGGAGATGATCAAGGTGAAATTAGAAAGGATTGTCGCTATGTCAATCGCaaatag 984 0.3974 MANKSCSNYSFLFLLILLHFNLGKSQLQVNYYSTSCPKAEEIIKQQVTELYHWHGDTAISWVRNLFHDCVVKSCDASLLLSTVRGVVVSEQTSGRSFGMRNFKYVNNIKTAVEKECPLTVSCADIVALSARDGIIMLGGPNIEMKTGRKDSKESYSTVVEEFIPNHNDSISLVLSRFQAVGVDVEATVALLGAHSVGRVHCMNLVHRLYPTVDPTLNPIHAAYLKRRCPTPYPDPKAVQYVRNDLKTPMIIDNNYYKNILQHKGLLTIDEELATDPITAPYVQKMAEDNDYFNEQFSRAVLLLSENNPLIGDDQGEIRKDCRYVNRK 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02468 327 CDD secretory_peroxidase 26 324 IPR033905 GO:0004601|GO:0042744
Tsu01g02468 327 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g02468 327 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g02468 327 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g02468 327 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g02468 327 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g02468 327 PANTHER PEROXIDASE 25-RELATED 13 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g02468 327 Pfam Peroxidase 44 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g02468 327 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g02468 327 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g02468 327 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g02468 327 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g02468 327 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g02468 327 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g02468 327 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g02468 327 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu01g02468 327 Gene3D - 30 325 - -
Tsu01g02468 327 ProSiteProfiles Plant heme peroxidase family profile. 26 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu01g02468 327 SUPERFAMILY Heme-dependent peroxidases 26 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu01g02468 327 Gene3D Peroxidase, domain 2 164 303 - -
Tsu01g02468 327 PANTHER PEROXIDASE 21 13 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02468 Tsu-Chr1 26915103 26918416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02468 29 325 Peroxidase AT2G37130 75.168 1.21e-167 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02468 K00430 - gmx:100811277 536.569