Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02452 ATGCAAATTCCATTTAACCCATTTCAATCATCACTCATATTCATCcttatcttctttttctctcatgGTACAAACGCTTTTGGCACCATGGGACCAATCTCAGCTTCATTCGGAGAATACGAATTGTTTTGTTCCATCGATGCAAGTGGTAAACAAGACGTTATTTGTTGGGGCAAAAACACTACTTCACCGCaatctctttcttcttcctcttatGTTTCTAATATCCCTGCCATGTCAGCACTTTCTGGTGGTGAAGGTTTTCTCTGCGGCATTTTAGCAAACACTTCGCAGGCGTTATGTTGGGCTGCTACTTCCAAGCAAAACGCAGATCCCGTTTTGGTTCCACCGTCGTATCGGACCACCGCTTACTCCCACATCGCTGCCGGTAAGAATCATGTCTGTGCTGTTAGAGGATCTTACTACTCCGATCGTGATTCCGGAACTGTAGATTGTTGGCAAATTACTACAAAAACTAAGAATGGTACTTTAATGGCGGTGCTTAATGATTCGTTTTCTGATCAATCGGTTACTAATCTTGAAATGAATCGGGTTGTTTCCGGAGAAGGGTTTACCTGTGGTGGGGTTAGAGATGGAGGGTTAGTTTGTTGGGGACCCAATTCGGAAGATTTGAAAGTTTCCAATGTTTCGGATAGTTTTGCTGTTTTGGTGGCGGGGAGAACCGCCGTTTGTGGAGTTTCGAATATCTCCGGCGATGTGAGATGTTGGGGCGATATAGAACCTCCGCCAAAGGAGATTCATTTTGTTTCACTTTCGGGTGGAGCACGTCATTTCTGCGGCATTCGGGAGGATAATCATGTGGTTGAATGTTGGGGTGATTTGAATTCATCTTTGGTTCCAAAAGGTAATGGCTTCATGGCAATTGCTTCTTCTGATTATACAACTTGTGGTATAAGAGAAGATGATCTTCTTCTAGATTGTTGGTTGGTCAACGCTTCGAAGCCTGATTTTGACCCTCCTTTGGAGCTTTCAAGTCCTGGTCTTTGTAGGTCAAGTTCTTGTGAAGTTAATGAGTTTGATTTCAATGTTAGTGCTCTTAATGAACCAGATTTAACAAGTTTATGTGTTAGACAAGATTTGAGGATTTGTTCACCTTGTGGTTATAATTGTTCACAaggattttttttgtctagtccTTGTACTCAAAATTCTGATAGAGTTTGCACGGCTTGTTCTCTTTGTCAGAACAGTTCTTGTTTGAGTGTTTGTAAACTTCATTCTTCGAATGGGTTTTTGCATTGGCATCATCTTCGTAGATGGGTTGTCATAACCGGATCTtctgttttgtgtttgttgCTGATTTTGACTTTTGGGTGTATTTGTCGATGTTTGATTTGTTCAAGGGGACAACATAAGACAAAGAAACAATCTAAGTCTTGTATTGGTAAACATGAAcaagaggatgatgatgatgtgaatGGTAATGGTAATGGTCTTCttcattcatcttcttcagtTGCGTCTTGTCCTGGATTACCTCAGGTTTTCAGGCTTTCGGAGTTGAAAGACGCTACCAATGGTTTCAAGGAGTTTAATGAGCTTGGGAGGGGAAGTTATGGATTTGTTTACAAAGCTGCTTTGGCGGATGGGAGAGTGGTTGCTGTGAAGAGAGCGAACGCTGCGACAATAATACACACCAACAACCGCGACTTTGAAATGGAGTTGGAAATTTTGTGCAAAATTCGTCATGTTAATATTGTTAACTTGTTGGGTTATTGTGCTGAGATGGGTGAGAGGTTGCTTGTTTATGAGTATATGTCGCATGGTACACTTTCTGATCACATTCATGGTGGTCTTTCTCCTCTTAATTGGAGCTTAAGGCTTAAGATAGCTATGCAATCTGCAAAAGGTGTAGAGTACCTTCACAAAGAACTATTACCTCCAATTGTTCATAAGGATCTCAAGAGTTCCAATATTCTTTTGGATTCAGAATGGGGGGCTAGAGTTTCCGACTTTGGACATCTTACTTCGAGTGATAAAGATCTTAAAGGCGACATGGAAAGTGATGTTTACAGCTTCGGGATTGTGTTGTTGGAAATTCTAAGTGGAAGGAAGGCTTTTGATAGAGAATTTGATCCACCTAATGTTGTTGAGTGGGCAGTGCCTTTGATCAAACAAGGTAAGGCAGCTGCCGTAATCGATCGCTACGTTGCTCTTCCGAGAAATGTTGAGCCTTTGCTTAAACTTGGCGATATAGCAGAGCTTGCTGTGAGAGAGAATCCGAGTGAGCGTCCATCTATGTCGGATATAGCATCTTGGTTGGAGCAAATTGTGAAGGATGGATTGATCTTATAA 2316 0.3964 MQIPFNPFQSSLIFILIFFFSHGTNAFGTMGPISASFGEYELFCSIDASGKQDVICWGKNTTSPQSLSSSSYVSNIPAMSALSGGEGFLCGILANTSQALCWAATSKQNADPVLVPPSYRTTAYSHIAAGKNHVCAVRGSYYSDRDSGTVDCWQITTKTKNGTLMAVLNDSFSDQSVTNLEMNRVVSGEGFTCGGVRDGGLVCWGPNSEDLKVSNVSDSFAVLVAGRTAVCGVSNISGDVRCWGDIEPPPKEIHFVSLSGGARHFCGIREDNHVVECWGDLNSSLVPKGNGFMAIASSDYTTCGIREDDLLLDCWLVNASKPDFDPPLELSSPGLCRSSSCEVNEFDFNVSALNEPDLTSLCVRQDLRICSPCGYNCSQGFFLSSPCTQNSDRVCTACSLCQNSSCLSVCKLHSSNGFLHWHHLRRWVVITGSSVLCLLLILTFGCICRCLICSRGQHKTKKQSKSCIGKHEQEDDDDVNGNGNGLLHSSSSVASCPGLPQVFRLSELKDATNGFKEFNELGRGSYGFVYKAALADGRVVAVKRANAATIIHTNNRDFEMELEILCKIRHVNIVNLLGYCAEMGERLLVYEYMSHGTLSDHIHGGLSPLNWSLRLKIAMQSAKGVEYLHKELLPPIVHKDLKSSNILLDSEWGARVSDFGHLTSSDKDLKGDMESDVYSFGIVLLEILSGRKAFDREFDPPNVVEWAVPLIKQGKAAAVIDRYVALPRNVEPLLKLGDIAELAVRENPSERPSMSDIASWLEQIVKDGLIL 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02452 771 SUPERFAMILY Protein kinase-like (PK-like) 491 762 IPR011009 -
Tsu01g02452 771 ProSitePatterns Protein kinases ATP-binding region signature. 521 543 IPR017441 GO:0005524
Tsu01g02452 771 SUPERFAMILY RCC1/BLIP-II 33 282 IPR009091 -
Tsu01g02452 771 PANTHER OS01G0750732 PROTEIN 30 769 - -
Tsu01g02452 771 Gene3D Phosphorylase Kinase; domain 1 487 592 - -
Tsu01g02452 771 ProSiteProfiles Protein kinase domain profile. 515 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g02452 771 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 340 395 IPR001368 GO:0005515
Tsu01g02452 771 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Tsu01g02452 771 Gene3D Transferase(Phosphotransferase) domain 1 593 768 - -
Tsu01g02452 771 SMART serkin_6 515 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g02452 771 Gene3D - 77 325 IPR009091 -
Tsu01g02452 771 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR1 30 769 - -
Tsu01g02452 771 Pfam Protein kinase domain 515 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02452 Tsu-Chr1 26522963 26525369 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02452 12 765 Receptor kinase-like Gene Family AT3G59420 30.694 1.54e-107 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Tsu01g02452 Pkinase 1.5e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02452 - - gmx:100802259 1181.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02452 01 26522963 26525369 Tsu01g02452 01 26522963 26525369 ECH