Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02450 ATGGCATCCAACAGGGGTCAAGGAGGAATTCAACAGTTGTTGGCTGCTGAACAAGAAGCACAACGGATTGTGAATGCTGCAAAAAATGAAAAATCGGCTAGGTTGAAACAGGCCAAAGAAGAGGCTGAAAAGGAGATTGCTGAATACCGGTCTAAGCTTGAGGCTGAGTTTCAAAAGAAAGTGTCAGATAGTAGTGGTGATTCTGGAGCTAATGTCAAGCGACTTGACAAAGAAACCGACGAAAAAATCCATCACCTTAAAACAGAGGCTGCAAGAATATCAGATGATGTTGTCGCCATGCTTCTGAAGTATGTAACAACTGTGAAAAAATAG 333 0.4204 MASNRGQGGIQQLLAAEQEAQRIVNAAKNEKSARLKQAKEEAEKEIAEYRSKLEAEFQKKVSDSSGDSGANVKRLDKETDEKIHHLKTEAARISDDVVAMLLKYVTTVKK 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02450 110 Coils Coil 10 59 - -
Tsu01g02450 110 Pfam Vacuolar (H+)-ATPase G subunit 7 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Tsu01g02450 110 Gene3D - 1 110 - -
Tsu01g02450 110 PANTHER V-TYPE PROTON ATPASE SUBUNIT G1 1 110 - -
Tsu01g02450 110 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 3 109 IPR005124 GO:0016471|GO:0046961|GO:1902600
Tsu01g02450 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 110 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02450 Tsu-Chr1 26488338 26491659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02450 1 109 Primary Pumps ATPases(2) AT3G01390 73.394 6.95e-43 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02450 K02152 - gmx:100306550 176.792
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02450 01 26488338 26491659 Tsu01g02450 01 26488338 26491659 ECH