Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02406 atgttgaatacaatgttgaaTCATTTGCTAAACGTTTCGGCTAAAGTTGGTGGTTCTTCAGATGAAGAACTATGGAAAGCATGTGGAGGACCATTGGTGGATATTCATGGTCTTGGTCATAGGGTTTCCAATTTCCCTCAAGGACACATGGAGCAATCGAATGTTTCATCCGTCAATTGTTACCATCAAATGTTGAATCATTTGCTAAATGTTTCGGCTAAAGATGAAGAACTATGGAAAGCATGTGGAGGACCATTGATAGATATTTCTGGTGTTGGTCAAAGGGTTTCCTATTTCACTCAAAGAAACATGGAGCAATTGGTGGTTGTTCAGATGAAAAACTATGGAAAGCATGTGGATGACCATCGGTGGATATTCCCGGTGTTGGTCAAAGGGTTTCCTATTTCCCTCAAGGACACATGGAGCAAGTGA 432 0.3958 MLNTMLNHLLNVSAKVGGSSDEELWKACGGPLVDIHGLGHRVSNFPQGHMEQSNVSSVNCYHQMLNHLLNVSAKDEELWKACGGPLIDISGVGQRVSYFTQRNMEQLVVVQMKNYGKHVDDHRWIFPVLVKGFPISLKDTWSK 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02406 143 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 22 73 IPR044835 GO:0003677|GO:0006355|GO:0009725
Tsu01g02406 143 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 76 109 IPR044835 GO:0003677|GO:0006355|GO:0009725
Tsu01g02406 143 PANTHER AUXIN RESPONSE FACTOR 9 76 109 - -
Tsu01g02406 143 PANTHER AUXIN RESPONSE FACTOR 9 22 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02406 Tsu-Chr1 25945623 25947576 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02406 9 59 B3 DNA Binding Superfamily AT2G46530 53.704 1.45e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02406 K14486 - twl:120017135 58.151