Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02403 ATGAAGTCAAGATTTTTAAAAGGGTGTATTAACAAATGCAAGAAAGTGGGAAGTATAGTAAAAACTTGTGCTAATTGTGAAGATTGTTGTGAAAGGGGTTTATGGTCTCCTCTCCATGAAAGTAGCTCCATACCAAGTGATGTTCCAAAAGGTCACATGGTTGTATACATAGGTGAGAATCACAAGAGATATGTGATTAAAATTGCATTGCTTCATCATCCACTTTTCAAGGCCTTATTGGATCAAGCTCAAGAAGAGTATGATTTCATTGCAGATTCAAAACTATGTATTCCTTGTGATGAACATCTTTTCCTAAGTGTCCTTCGTTGTGCTAGTTCTCCACAGAATCAAAGGATTCAAGAAGTTGAGGGCAAGATTCTACAATTTTTCATGAAGAACATTGCTGATCAAGATCGTATCCTGCAAGGAAATCTTTGGATCTTTAGAAATTCTTGGTTGATTGTAAAACCATGGGATAGGGAAATAGATCCAAGAACTCTTGATTTTGACATGCTCCAGTATGGGTTCAGCTATGGAGATTACCACCCCACTGCAAAACTAAGGCCATGGGAAGGCACCTTGGATCTACTATGGGGGATGTGGAGGCATTAG 612 0.3856 MKSRFLKGCINKCKKVGSIVKTCANCEDCCERGLWSPLHESSSIPSDVPKGHMVVYIGENHKRYVIKIALLHHPLFKALLDQAQEEYDFIADSKLCIPCDEHLFLSVLRCASSPQNQRIQEVEGKILQFFMKNIADQDRILQGNLWIFRNSWLIVKPWDREIDPRTLDFDMLQYGFSYGDYHPTAKLRPWEGTLDLLWGMWRH 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02403 203 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 2 119 - -
Tsu01g02403 203 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 119 IPR003676 GO:0009733
Tsu01g02403 203 Pfam Auxin responsive protein 40 110 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02403 Tsu-Chr1 25923615 25925651 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02403 46 118 Calmodulin-binding Proteins AT4G34750 48.052 1.21e-19 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02403 K14488 - gmx:100812927 206.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02403 01 25923615 25925651 Tsu01g02403 01 25923615 25925651 ECH