Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02399 ATGAATTGTTTTCCATTCAACATCTACTACGGAGAAAAGAAGGGTGATGCTAAAGGCTTGCAAATGCAATCACTATCGGGTTTATCAAACAATTCTACTTATGGTGGAAGCGAGGTGCGAAGAACTGGTTCTGACTTGAATTCTCTCGATGCTTCAGACAATAGCACAGACTCCCTTAGGAGGAATGCATTTCCGAATTTGTCCCAAAGACCCAGCAACCTGAGAGTATTTACTGTATCTGAACTGAAATCAGCCACCAAGAATTTTGGTCGATCTGTTATGCTAGGTGAGGGTGGATTCGGGTGTGTCTACAAGGGATTGATCAAGAGTTCAGATGATCCGCCTAGTAAAATTGAAGTTGCAGTTAAACAACTTGGTAAAAGAGGAATTCAGGCAAGGTTTTGCATGCTATATTTCCTACTGAAAGGGCATAAGGAATGGGTGACTGAAGTGAATGTTCTAGGTATTGTTGAGCATCACAATCTTGTGAAACTAGTGGGCTATTGTGCTGATGATGATGAAAGAGGAATCCAGCGGCTTTTGATATATGAATATATGCCCAACGGAAGCGTGGAACACCATTTATCCCCACGATCAGAAACTCCTCTCTCATGGAGTAGGAGACTGAAAATTGCCCAAGACGCTGCTCGTGGCTTAACATACCTGCACGAGGAAATGGATTTTCAGATAATTTTCAGAGATTTCAAATCTTCGAATATCCTTCTGGACGAGAAGTGGAATGCAAAGCTGTCTGACTTCGGATTAGCAAGATTGGGACCATCTGATGGGTTAACTCATGTTTCAACAGCGGTTGTAGGAACAATAGGGTATGCTGCTCCTGAATATATTCAAACTGGACGTCTCACTTCAAAGAGTGATGTATGGAGCTACGGTGTTTTTCTCTATGAACTCATTACTGGCAGGCGGCCTTTAGAACGAAATCGTCCCAAGAGTGAACAAAAGCTGTTAGAATGGATAAGACCATACCTTTCAGACGTGAAGAAATTTCAACTAATATTGGATCCAAGACTTGAGAGGAAACACCTCTCAAAGTCAGCCCAAAAACTTGCTTTAGTAGCCAACCGATGCTTGGTCAGAAACCCTAAGAATCGCCCAAAGATGAGTGAAGTATTAGAAATGATTGATCGGATTGTGGAATCTTCGGTTAGTGCTAATCCACAACCACCCTTGAATAGTGTAGCCTCTGCCGATGATTCTCAGGACACTGAAATAAGGAACAAGAAACGGACCATGCATCCAAAACCAGATTGTAATTGGTTTAGACTGTGGGGACCAAAGCTTTTAAGAACATGCTGA 1317 0.4222 MNCFPFNIYYGEKKGDAKGLQMQSLSGLSNNSTYGGSEVRRTGSDLNSLDASDNSTDSLRRNAFPNLSQRPSNLRVFTVSELKSATKNFGRSVMLGEGGFGCVYKGLIKSSDDPPSKIEVAVKQLGKRGIQARFCMLYFLLKGHKEWVTEVNVLGIVEHHNLVKLVGYCADDDERGIQRLLIYEYMPNGSVEHHLSPRSETPLSWSRRLKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDEKWNAKLSDFGLARLGPSDGLTHVSTAVVGTIGYAAPEYIQTGRLTSKSDVWSYGVFLYELITGRRPLERNRPKSEQKLLEWIRPYLSDVKKFQLILDPRLERKHLSKSAQKLALVANRCLVRNPKNRPKMSEVLEMIDRIVESSVSANPQPPLNSVASADDSQDTEIRNKKRTMHPKPDCNWFRLWGPKLLRTC 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02399 438 Gene3D Phosphorylase Kinase; domain 1 62 185 - -
Tsu01g02399 438 PANTHER KINASE 1B 9 427 - -
Tsu01g02399 438 ProSitePatterns Protein kinases ATP-binding region signature. 95 123 IPR017441 GO:0005524
Tsu01g02399 438 ProSiteProfiles Protein kinase domain profile. 89 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g02399 438 Pfam Protein kinase domain 93 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu01g02399 438 SUPERFAMILY Protein kinase-like (PK-like) 66 381 IPR011009 -
Tsu01g02399 438 MobiDBLite consensus disorder prediction 30 57 - -
Tsu01g02399 438 CDD STKc_IRAK 95 384 - -
Tsu01g02399 438 Gene3D Transferase(Phosphotransferase) domain 1 186 401 - -
Tsu01g02399 438 MobiDBLite consensus disorder prediction 389 411 - -
Tsu01g02399 438 MobiDBLite consensus disorder prediction 389 406 - -
Tsu01g02399 438 PANTHER OS01G0588500 PROTEIN-RELATED 9 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02399 Tsu-Chr1 25832413 25834980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02399 1 381 Glycoside Hydrolase AT3G07070 42.487 1.95e-89 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tsu01g02399 Pkinase 2.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02399 - - gmx:100305438 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02399 01 25832413 25834980 Tsu01g02399 01 25832413 25834980 ECH