Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02397 ATGACTTCACAAGTTGTTTTCCAAACATTCTCTCAATCAGAAACCAAACCCTCCACCGTCACCACCACCGTTTCCACCACCGCCAATTCTGATCCCAATGCTCAACTTACTACTACCGTCAAAAGAAAAACCTCCTCTCGTTCCACCAAAGACCGTCACACCAAAGTTAACGGCCGTGGCCGCCGTGTCCGTATGCCACCTCTCTGTGCTGCTAGAGTTTTCCAGCTGACACGTGAGTTAGGTCACCGTTCCGATGGTGAAACAATCGAGTGGCTTCTCCGACAAGCTGAGCCGGCTATTATCGCTGTCACTGGTTCCGGCACTGTTCCCGCCGGTCCTGTTTCAATGACCTCGCCTGCTTCCTCTTCCTCTAAGCCGTCTGTGTCGTGCAATGTTGTTCAGCCGGTGTTGTCGGTTGGTCCCAGCGATGGAGGAATGTTTGCAGCTGCTGCTCTGCCGCTACAGCAGCCGAGTTGCCGGCTTGATCTATGTCAGCCGACTGGAATGGAATATGCTGCTGCGAATAGGTACCATCATATGCCGTTCACGGCGTTGCTGTTGCAACCGACGTCGGCGGAGGAAAATCAGCAAGAAGGATCTCTGAGTGTTAACGAACAATGA 621 0.5266 MTSQVVFQTFSQSETKPSTVTTTVSTTANSDPNAQLTTTVKRKTSSRSTKDRHTKVNGRGRRVRMPPLCAARVFQLTRELGHRSDGETIEWLLRQAEPAIIAVTGSGTVPAGPVSMTSPASSSSKPSVSCNVVQPVLSVGPSDGGMFAAAALPLQQPSCRLDLCQPTGMEYAAANRYHHMPFTALLLQPTSAEENQQEGSLSVNEQ 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02397 206 Pfam TCP family transcription factor 48 148 IPR017887 -
Tsu01g02397 206 PANTHER TRANSCRIPTION FACTOR TCP16-RELATED 27 130 - -
Tsu01g02397 206 MobiDBLite consensus disorder prediction 9 59 - -
Tsu01g02397 206 MobiDBLite consensus disorder prediction 9 43 - -
Tsu01g02397 206 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 27 130 IPR005333 GO:0003700
Tsu01g02397 206 ProSiteProfiles TCP domain profile. 49 103 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02397 Tsu-Chr1 25811105 25811725 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02397 49 189 TCP Transcription Factor Family AT2G37000 50.980 8.85e-44 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Tsu01g02397 TCP 1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02397 - - cam:101510590 262.692