Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02387 ATGCTTAAATCTTTGGTTAGGAAAATACAAAAGGGACTCTCACTAATTGTACCCAAAAACTACTTCAATGAAAATGTTAGGGAAGGATATTTTGTTGTGGTTGCAATGAAAGATGGAGAAACCAAAAGGTTTATGATTGGGTTAGAGTACTTGAGTGATCCTGTATTTTTGAGATTACTTGATCAAGCTAGGGAAGAGTATGGTTTTAGACAGCAGGGAACTCTTGCAGTCCCTTGTGGGCCTCAAGAATTACATAACATTCTACATAGTTCTAGAGGGTAG 282 0.3723 MLKSLVRKIQKGLSLIVPKNYFNENVREGYFVVVAMKDGETKRFMIGLEYLSDPVFLRLLDQAREEYGFRQQGTLAVPCGPQELHNILHSSRG 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02387 93 Pfam Auxin responsive protein 21 88 IPR003676 GO:0009733
Tsu01g02387 93 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 92 IPR003676 GO:0009733
Tsu01g02387 93 PANTHER SMALL AUXIN-UP RNA-RELATED 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02387 Tsu-Chr1 25659608 25659889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02387 2 88 Calmodulin-binding Proteins AT4G34750 31.818 1.05e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02387 - K14488 gmx:100775431 121.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03891 07 45066422 45066938 Tsu01g02387 01 25659608 25659889 PCT