Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02386 ATGCTTAGTTCTTTTGTTGGAAAGGTACAAAAAAGTTTATTAGTCTTGGTACCAAGAAAGCATGCATTGAGCTACTTTAATGAAGAAGATTATTCCACAAATGAGGTGGTAGCCGATGATGTTATGAAAGGTTACTTTGCTGTTCTTGCAAGGAAGGGTGAAGAAACTAGAAGGTTTATTATTGGGTTAGATTACTTAACTGATCCTGCTTTTGTTGGATTACTTGATGAAGCTTGGAAGGAATATGGTTTCGGACAGAAGGGAACTCTTGTTGTTCCGTGTCGGCCGATAGAATTACAGAACATTTTAGATGGTCGGAAAACATAA 327 0.3731 MLSSFVGKVQKSLLVLVPRKHALSYFNEEDYSTNEVVADDVMKGYFAVLARKGEETRRFIIGLDYLTDPAFVGLLDEAWKEYGFGQKGTLVVPCRPIELQNILDGRKT 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02386 108 Pfam Auxin responsive protein 35 103 IPR003676 GO:0009733
Tsu01g02386 108 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 107 - -
Tsu01g02386 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 107 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02386 Tsu-Chr1 25656479 25656805 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02386 27 95 Calmodulin-binding Proteins AT3G43120 42.029 7.14e-11 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02386 - K14488 ccaj:109813579 135.961