Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02385 ATGCATAGTTCTTTTATTGGGAAGGTACGTAAGAGTTTATCACTCTTTCTACCCAAAAAATATGTATTGAGCAAATGGAATGAAGATCATGCCATAGCCAAAAGTGAGCTTGCAGATGATGTTATGAAAGGTTGCTTTGCTGTTCTTGCAAGGAAGGGTGAGGAAACTAGAAGGTTTATTGTTGGGTTAGATTACTTAAGTGATCCTACTTTTTTAGGATTGCTTGATGAAGCTGTGGAGGAATATGGTTTTAGACAAAAAGGAACTCTTGTTGTTCCATGTCGGCCGATAGAATTAGAGAACATTTTAGATGGTCGGAAAACAATGAGAAGAAGACAGCCGCAAAATTAA 351 0.3732 MHSSFIGKVRKSLSLFLPKKYVLSKWNEDHAIAKSELADDVMKGCFAVLARKGEETRRFIVGLDYLSDPTFLGLLDEAVEEYGFRQKGTLVVPCRPIELENILDGRKTMRRRQPQN 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02385 116 Pfam Auxin responsive protein 35 103 IPR003676 GO:0009733
Tsu01g02385 116 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 2 107 - -
Tsu01g02385 116 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 107 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02385 Tsu-Chr1 25650030 25650380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02385 27 94 Calmodulin-binding Proteins AT5G20810 42.647 1.06e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02385 - K14488 gmx:100818734 122.864
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02385 01 25650030 25650380 Tsu01g02385 01 25650030 25650380 ECH