Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02381 ATGCTTAGTTCTTTTTTTGGGAAGGTACAAAAGAGTTTATCAGTCTTTGTACCAAGAAAGCATGCATTGAGCTACTGGAATGAAGATCATGCCACAACCACAACTGAGCTTGCTGATGATGTTATGAAAGGTTACTTTGCTGTTCTTGCAAGGAAGGGTGAGGAAACTAGAAGGTTTATTGTTGGATTAGATTACTTAACTGATCCTGCTTTTTTGGGATTACTTGATGATGCTTGGGAGGAGTATGGTTTTAGACAGAAAGGAACTCTTGTTGTTCCGTGTCGGCCGATAGAATTACAGAATATTCTAGATGGTCGGAAAATATAG 327 0.3884 MLSSFFGKVQKSLSVFVPRKHALSYWNEDHATTTTELADDVMKGYFAVLARKGEETRRFIVGLDYLTDPAFLGLLDDAWEEYGFRQKGTLVVPCRPIELQNILDGRKI 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02381 108 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 108 - -
Tsu01g02381 108 Pfam Auxin responsive protein 33 103 IPR003676 GO:0009733
Tsu01g02381 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 108 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu01g02381 Tsu-Chr1 25618279 25618605 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02381 27 95 Calmodulin-binding Proteins AT3G43120 42.029 1.14e-11 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02381 - K14488 gmx:100818734 139.813