Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu01g02332 ATGGCGGTTCCTGGGAGGCGCAATGGTCTAAACGATGACGATGAAGAAGAATCCAACGGTCTTTTCGAAGAAGAAGTTCTCGTTGAAGAAACTGACACTCCTCCTCATCTTCGTGACCTCTCTCATGCCGCTCAAAACGGCGACCTCAACGCCCTCCGCCTCGCTCTCGATAACTTGAGTGGTAGTATTGATGAACCGGTGGAGGATGGCGATACGGCTCTTCATTTGACCTGTTTATATGGCCATTTCCAATGCGCACAGTTGCTACTAGAAAGAGGAGCTGACTTGGAGGCTAAGGATGAAGATGGGGCAATTCCTTTACACGATGCATGTGCAGGAGGATTTTTGGAGATAGTACAACTTCTATTTAACAGAGCTAGTGATGCTGAGCATATAAAAAGGATGCTAGAATCAGTTGATTCCGAGGGTGATACTCCTCTTCATCATGCTGCAAGAGGTGAGCATGCTGATGTAATTAGGTTGTTGCTGTCTAATGGTGCGTCATCCACAAAGGAAAACTTATATGGAAAGACCCCTGCGGAGTTACCTGAACACAACACAGAAGCTAGGAGGCTGCTTGAAGCTACTGCTACTGCCATGGCAATCTAA 609 0.4696 MAVPGRRNGLNDDDEEESNGLFEEEVLVEETDTPPHLRDLSHAAQNGDLNALRLALDNLSGSIDEPVEDGDTALHLTCLYGHFQCAQLLLERGADLEAKDEDGAIPLHDACAGGFLEIVQLLFNRASDAEHIKRMLESVDSEGDTPLHHAARGEHADVIRLLLSNGASSTKENLYGKTPAELPEHNTEARRLLEATATAMAI 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu01g02332 202 ProSiteProfiles Ankyrin repeat profile. 142 174 IPR002110 GO:0005515
Tsu01g02332 202 SMART ANK_2a 35 65 IPR002110 GO:0005515
Tsu01g02332 202 SMART ANK_2a 142 171 IPR002110 GO:0005515
Tsu01g02332 202 SMART ANK_2a 69 98 IPR002110 GO:0005515
Tsu01g02332 202 SMART ANK_2a 102 131 IPR002110 GO:0005515
Tsu01g02332 202 MobiDBLite consensus disorder prediction 1 20 - -
Tsu01g02332 202 ProSiteProfiles Ankyrin repeat region circular profile. 142 168 - -
Tsu01g02332 202 Pfam Ankyrin repeats (3 copies) 40 100 IPR002110 GO:0005515
Tsu01g02332 202 Pfam Ankyrin repeats (3 copies) 102 170 IPR002110 GO:0005515
Tsu01g02332 202 ProSiteProfiles Ankyrin repeat profile. 69 101 IPR002110 GO:0005515
Tsu01g02332 202 PANTHER SOWAH (DROSOPHILA) HOMOLOG 1 196 - -
Tsu01g02332 202 PANTHER TANKYRASE-LIKE 1 196 - -
Tsu01g02332 202 ProSiteProfiles Ankyrin repeat profile. 102 134 IPR002110 GO:0005515
Tsu01g02332 202 ProSiteProfiles Ankyrin repeat region circular profile. 102 128 - -
Tsu01g02332 202 ProSiteProfiles Ankyrin repeat region circular profile. 69 101 - -
Tsu01g02332 202 Gene3D - 34 201 IPR036770 -
Tsu01g02332 202 SUPERFAMILY Ankyrin repeat 40 182 IPR036770 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu01g02332 40 193 Ion Channels AT2G25600 31.351 1.07e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu01g02332 - - gmx:100527544 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g02332 01 25016412 25018404 Tsu01g02332 01 25016412 25018404 ECH